Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1507 ATGTTCCCAAAGCCCCACCACCAACCACCGCCCCATTCTCAGCCCTTTCCCCGTTCTTTTTCCGTCGCCGCCACTCCGCCGCCGCGTGATTCACCAGCCTCCGCCGATGAGGATTCCGCGGCCGGTCCCTCGCCTCTCGCTCACGCCATGGTTCTCAAAGAACCGACCTCCACCGGCGACGGAGCTTCCATCGAGGTTGTACGCCGCCCCCGCGGCCGCCCGCCGGGATCCAAGAACAAGCCGAAGCCAGCGGCCGTCGTTGTCGCCGGCCGCGAGGCCGAGCCGGCGATGAGTCCTTATGTACTCGAAGTCCCCGGCGGCAGCGATGTCGTCGAATCGATTTCCCGATTTTGCCGCCGCAGAAACACTGGGCTCTGTATTCTCAACGCTTACGGAACCGTCGCTGACGTCACTCTCCGGCAACCGTCGTCGTCTCCGGTCAGTACAGTTACTTTCCATGGACGATTCGATATTCTATCCGTCTGCGCAACTTTTGTTCCTCACACGACGTCGTTTCCAATTCCTAACGGATTCACCATCACGCTAGCCGGACCGCAGGGCCAGATCTTCGGCGGCTTGGTTGCCGGATCTTTAATCGGCGTCGGAACCGTCTATGTTATAGCCGCTTCATTCAACAATCCGTCGTATCAGCGGCTGCCATCGGAGGATGAGGTCAGAAAATTAACCTTCAGCGATGTTGAAGAAGCTCACTCTCCGATCTCTGGCGGCAAAGATAGCGAAAACACCGCCGCAGCCGCCACCACAGAGACCTGCGGTTTGCTGCCGATGTACAGCACTCACTCCTCTTCCGACGTAATTTGGACTCCGGCCGCCAGACAACCGCCTCCACCGCACCATCGTCAGTACTAA 870 59.31 MFPKPHHQPPPHSQPFPRSFSVAATPPPRDSPASADEDSAAGPSPLAHAMVLKEPTSTGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAGREAEPAMSPYVLEVPGGSDVVESISRFCRRRNTGLCILNAYGTVADVTLRQPSSSPVSTVTFHGRFDILSVCATFVPHTTSFPIPNGFTITLAGPQGQIFGGLVAGSLIGVGTVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEAHSPISGGKDSENTAAAATTETCGLLPMYSTHSSSDVIWTPAARQPPPPHHRQY 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29283205 29284074 - CePI673135_11g015070.1 Cec11g1507 216719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1507 289 CDD DUF296 99 211 IPR005175 -
Cec11g1507 289 MobiDBLite consensus disorder prediction 1 84 - -
Cec11g1507 289 Gene3D - 98 237 - -
Cec11g1507 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 54 247 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec11g1507 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Cec11g1507 289 MobiDBLite consensus disorder prediction 1 16 - -
Cec11g1507 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 212 IPR005175 -
Cec11g1507 289 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Cec11g1507 289 FunFam AT-hook motif nuclear-localized protein 98 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0696 Cec-Chr11:7692374 Cec11g1507 Cec-Chr11:29283205 3.50E-32 dispersed
Cec11g1507 Cec-Chr11:29283205 Cec08g1205 Cec-Chr8:23980663 8.40E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1507 - - - 0.0