Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1509 ATGGTGCTTGAAGGTGTGTCTGTTCTTGCTAATCAAATTAGTGTCTCATCTTCCCCTTTATCTCTAGAATCTAATTGCATTAGACTTGGCATAACTCTTGTAATGAGTTACCCATCACATGTACAGCGCCACCCCCTTCCCCTTTCCCCCGAATCTCTGCTGCTTCATTTCTCCATCTTCATCAGGTTGATTTTAGTTTTTTTAGGTTTGTCAATGGAGAACTTGGATGGAAAATCTTCAGATTCTACGCAATGCGTTCGCGTTGCTGTTAATATCAGACCTTTGATTACACCCGAGCTAATGGTTGGATGCACGGATTGTATTACAGTTGTGCCTGGCGAACCTCAGGTTCAAATTGGCTCACATGTATTCACATACGACAATGTGTATGGTAGTGCTGGATCACCATCTTATGCATTATACGACGATTGCGTTGCTCCACTAGTCGATGCATTATTTCAGGGTTATAACGCTACTGTTCTTGCTTATGGACAGACGGGGTCTGGAAAGACTTACACAATGGGGACAAATTATAGTGGTGAAGGAAGTAATGATGGAGTAATACCCAAAGTAATGGAAAAAATATTCAAAAAGGTCGAGACAAAGAAGGATTCTACCGAATTCTTGATCAGAGTATCATTTATTGAGATATTTAAGGAAGAAGTCTTTGATTTGCTTGATGCAAGTACTTGCCTTAACACAAAGGGTGAAGGGACAAAGCCTTTTACTCCTCCACGAGTTCCAATACAAATACGAGAAACGGTTAATGGTGGAATTACACTTGTTGGCGTCACCGAGGCAGAAGTTCGCACCACAGAAGAAATGACATCTTACTTGTCTCGTGGTTCATTAGCACGTGCAACTGGAAGTACTAACATGAATAGCCAGTCAAGTCGATCACATGCCATATTTACTATTACCATGGAGCAAAAGAAGAAGCTTGGGCGAGGCATGTCTCATGATGATACATGTGACGACATTCTATGTGCTAAGCTCCACTTGGTGGATCTTGCCGGTTCTGAAAGAGCCAAACGAACAGGTGCTGATGGCATGCGCTTTAAAGAAGGCGTTCATATCAACAAGGGCCTTTTGGCACTTGGCAATGTCATAAGTGCATTGGGAGATGAGAAGAAACGAAGAGAAGGATGTCATGTTCCCTACCGTGATAGCAAGTTAACACGTTTGCTACAGGATTCTCTTGGTGGCAACAGCAGAACAGTGATGATTGCTTGTGTTAGTCCTGCTGACTCAAATGCAGAGGAGACCTTAAACACGCTAAAATATGCTAATCGTGCTCGCAATATTCAAAATAAAGCAGTTATCAACCGAGATCCTGTAGGAGCTCAAATACAAAAAATGCGAAGTGAAATCGAGCAATTGCAAGCTGAGCTTTTATTCTATCGTGGTGATGCAACTTTACCATATGAGGAGCTGCAGATTCTAAAGCATAAAATATCATTACTTGAAGCAAGCAATGGAGAGTTGTTGCGGGAGCTTCAAGAACGTCGAGTCACTTGCGATCATTTGTCTCAGCGTGCTATTGATGCTCAGGTTGAAAAAGACAAACTTGCCATGATAATTGAATCCGTGCGGAATGGCAAATCTTTAGATGAGATTGAATCCAACTACGATAAGGATTGTGAATTGGTCAAGAGTTATGTTTCAAAAATTCAAGAGCTAGAAGGGGAGGTACTGAGATTGCAAAGCTTTAAGAGTTCAAAACACAGCCGATATGTAGATCTTGTGGAGTCTGATGATGATAGGCCGCAGTCTAGTAACATCTTATTTCCATGTTCAAATGAGCATTCGTCGGAATATGATCCCAAAGCTGTAGATATTTCAGATGGAATGGAAGATCATGAAAAGGAGCTTGAACATTCAACAATGCAAGAACGATTAGACAGGGAGCTAAAAGAATTGGATAAGAAACTTGAGCAGAAGGAGGCTGAAATGAAACGGTTTGCTGGTACGGATACCTCTGTTCTAAAACAACATTATGAAAAGAAGGTCCATGAATTGGAACAAGAAAAGAGAGCTTTACAGAAAGAGATCGAGGAACTTAGATGTAATCTTTCGAACATATCTTCTACATCTGATGATGGAGCGCAAAAGTTGAAGCAAGAATATCTGCAGAAACTAAATTTCCTAGAGACTCAGGTCTCGGAGTTGAAGAAGAAACAAGATGCTCAGGCTCAACTATTGAGACAGAAGCAAAAGAGTGATGAGGCAGCAAAAAGATTACAGGATGAGATCCACAGAATTAAGACCCAAAAGGTTCAACTTCAACACAAGATTAAACAGGAATCCGAGCAATTTAGATTATGGAAGGCTTCGAGAGAGAAGGAAGTTCTCCAGCTGAAGAAGGAGGGTAGGAGAAATGAATATGAGATGCACAAGCTCTTAGCTTTGAATCAAAGGCAGAAAATGGTCTTGCAACGAAAGACAGAAGAAGCCGCTCAGGCAACAAAAAGGCTTAAAGAGCTTTTAGAATCTCGAAAGGCAGCACGTGAATCTTCCGGTGGGGGATCAAATGGTCCTGGAATTCAGGCTCTAATGCAGAATATTGAGCACGAGCTTGAAGTTACAGTTAGGGTGCACGAGGTTCGTTCTGAATACGAACGTCAAATGGAAGAGAGGTCTAAAATGGCCAAGGAATTGGCTAAGCTTAAGGAGGAAGAAGAATTACACAGAGGAGCTAATTTGAGTGATTGTACTCAAACAATGTCACCTGGTGCAAGAAATTCAAGAATTTTTGCCCTCGAAAACATGCTCGCTACATCATCCAGCTCTTTGGTTTCCATGGCTTCACATTTGTCGGAGGCAGAAGAGCGTGAGCGCGTTCTTGGTGGTAGGGGACGTTGGCATCAAGTGCGATCTTTAGCCGATGCAAAGAACATTATGAATTTTTTGATGAATTTAGCATCCTCTTCAAGGTGTTTGCTATGGGATAAAGAGTTTGCTTCTAGAGAGAAGGATTCGGAAATTAGAGAATTGAAACAAAAAATAGTGAATCTTAGTGGCATGCTGAAAAAATCAGAAGCGCAAAAGGCAGAACTTATTCATCAGAACTCGGCTTTGAAAAGATGTTCCCCGGTTAATAGCGGGGGGCATAACTACGATTTATTAACCGGGGGGCATAACTACGATTTACGCAAGCAGGAGCATCGAAATTCTGTCGTATTACCTGCGGACATGGATACATCAGAATCAGATTATGCAGATCTTAGTTCAGATAGCGATGATATTAATTATGATTGGGAGAGATCCATGAAACGACGATTTGATAGGAAAAAAGTCTCTAAAGCTAAGGGTCGTTCAAGTATGGTTGTCTCAGATGGCACAAATAGTACAGAGTTTAACTTGGATAGTTCTGGCGATGGGGTACTTCGTGGGAATGAATCCACTGCTAGCACCATTGTTTGTTGTACTTGTAGCAGATCTTCTTCCTGCAAGACAACAAAGTGCCAATGTAGAGCGAATGGTGGTGCTTGTGGCTTGTCATGTGGTTGCATACCATCAAAGTGTTCAAACAGAGGTAGTAAAAGTGACCGGGACGCATCATTGCAACTGGATTCAACCAGGAATGTTCGAAATGCTACGGAAAACGATGAAACCGATGAGGAGAGTCGTGACCTTGTTTCTCATGGTGCAAGGTTGCTTCAAAATGCATTGGTTGAGAGACCAAGTGACGACGCTCCTCCAGCTGAAGATGGTGGCGCAAAAAGAAAGCCTCTATCAGACATCGGAAACACATTGGTGAAATCAAAGACAAACAAGCCAAACCAGAGAAAGAAATGGCGAAAATCTACCATTCAACTGATTCCAACCCCACAAGCATCTTCCCAACCAGAAAAACCCGAAGCCACCCAGAAGACTGAGAATGATTCGAATGAGGTTGTCAACGTCCCGTTGAAACTTCCCCGAGCTATGCGATCTGCTGCTGCGAACGGCGGGAACCTACTGAGAGAAAGAAACTCCGATCAGCTGGAAGATTCGGTCAGCGGAAACAAAGAGCATGAACTCATTGTTCCAAAAAGAGTGGATGAGAAAGAGAACTGCAACCGTTAA 4068 42.28 MVLEGVSVLANQISVSSSPLSLESNCIRLGITLVMSYPSHVQRHPLPLSPESLLLHFSIFIRLILVFLGLSMENLDGKSSDSTQCVRVAVNIRPLITPELMVGCTDCITVVPGEPQVQIGSHVFTYDNVYGSAGSPSYALYDDCVAPLVDALFQGYNATVLAYGQTGSGKTYTMGTNYSGEGSNDGVIPKVMEKIFKKVETKKDSTEFLIRVSFIEIFKEEVFDLLDASTCLNTKGEGTKPFTPPRVPIQIRETVNGGITLVGVTEAEVRTTEEMTSYLSRGSLARATGSTNMNSQSSRSHAIFTITMEQKKKLGRGMSHDDTCDDILCAKLHLVDLAGSERAKRTGADGMRFKEGVHINKGLLALGNVISALGDEKKRREGCHVPYRDSKLTRLLQDSLGGNSRTVMIACVSPADSNAEETLNTLKYANRARNIQNKAVINRDPVGAQIQKMRSEIEQLQAELLFYRGDATLPYEELQILKHKISLLEASNGELLRELQERRVTCDHLSQRAIDAQVEKDKLAMIIESVRNGKSLDEIESNYDKDCELVKSYVSKIQELEGEVLRLQSFKSSKHSRYVDLVESDDDRPQSSNILFPCSNEHSSEYDPKAVDISDGMEDHEKELEHSTMQERLDRELKELDKKLEQKEAEMKRFAGTDTSVLKQHYEKKVHELEQEKRALQKEIEELRCNLSNISSTSDDGAQKLKQEYLQKLNFLETQVSELKKKQDAQAQLLRQKQKSDEAAKRLQDEIHRIKTQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEAAQATKRLKELLESRKAARESSGGGSNGPGIQALMQNIEHELEVTVRVHEVRSEYERQMEERSKMAKELAKLKEEEELHRGANLSDCTQTMSPGARNSRIFALENMLATSSSSLVSMASHLSEAEERERVLGGRGRWHQVRSLADAKNIMNFLMNLASSSRCLLWDKEFASREKDSEIRELKQKIVNLSGMLKKSEAQKAELIHQNSALKRCSPVNSGGHNYDLLTGGHNYDLRKQEHRNSVVLPADMDTSESDYADLSSDSDDINYDWERSMKRRFDRKKVSKAKGRSSMVVSDGTNSTEFNLDSSGDGVLRGNESTASTIVCCTCSRSSSCKTTKCQCRANGGACGLSCGCIPSKCSNRGSKSDRDASLQLDSTRNVRNATENDETDEESRDLVSHGARLLQNALVERPSDDAPPAEDGGAKRKPLSDIGNTLVKSKTNKPNQRKKWRKSTIQLIPTPQASSQPEKPEATQKTENDSNEVVNVPLKLPRAMRSAAANGGNLLRERNSDQLEDSVSGNKEHELIVPKRVDEKENCNR 1355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29298655 29312882 + CePI673135_11g015090.1 Cec11g1509 216721

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1509 1355 Coils Coil 995 1015 - -
Cec11g1509 1355 PRINTS Kinesin heavy chain signature 331 349 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 PRINTS Kinesin heavy chain signature 155 176 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 PRINTS Kinesin heavy chain signature 291 308 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 PRINTS Kinesin heavy chain signature 385 406 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 MobiDBLite consensus disorder prediction 583 607 - -
Cec11g1509 1355 FunFam kinesin-like protein KIN-4A isoform X1 78 463 - -
Cec11g1509 1355 ProSiteProfiles Kinesin motor domain profile. 85 435 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 Pfam Kinesin motor domain 118 435 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 Coils Coil 626 657 - -
Cec11g1509 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 468 IPR027417 -
Cec11g1509 1355 Coils Coil 865 892 - -
Cec11g1509 1355 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 80 1330 IPR027640 GO:0003777(InterPro)|GO:0003777(PANTHER)|GO:0005875(PANTHER)|GO:0007018(InterPro)|GO:0007052(PANTHER)|GO:0051231(PANTHER)
Cec11g1509 1355 MobiDBLite consensus disorder prediction 1197 1214 - -
Cec11g1509 1355 MobiDBLite consensus disorder prediction 1176 1355 - -
Cec11g1509 1355 Coils Coil 450 470 - -
Cec11g1509 1355 ProSitePatterns Kinesin motor domain signature. 330 341 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cec11g1509 1355 MobiDBLite consensus disorder prediction 1324 1355 - -
Cec11g1509 1355 Gene3D Kinesin motor domain 80 469 IPR036961 -
Cec11g1509 1355 Coils Coil 811 838 - -
Cec11g1509 1355 Coils Coil 663 697 - -
Cec11g1509 1355 SMART CXC_2 1137 1181 IPR033467 -
Cec11g1509 1355 Coils Coil 706 771 - -
Cec11g1509 1355 SMART kinesin_4 83 443 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec11g1509 1355 MobiDBLite consensus disorder prediction 1267 1299 - -
Cec11g1509 1355 CDD KISc_KIF4 85 436 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1509 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1898 Cec-Chr10:33806410 Cec11g1509 Cec-Chr11:29298655 9.40E-63 dispersed
Cec10g2116 Cec-Chr10:35778381 Cec11g1509 Cec-Chr11:29298655 7.80E-44 dispersed
Cec11g0418 Cec-Chr11:4373669 Cec11g1509 Cec-Chr11:29298655 7.40E-56 dispersed
Cec05g2236 Cec-Chr5:33844476 Cec11g1509 Cec-Chr11:29298655 9.60E-260 transposed
Cec11g1509 Cec-Chr11:29298655 Cec04g1535 Cec-Chr4:34846957 7.80E-28 wgd
Cec11g1509 Cec-Chr11:29298655 Cec08g1198 Cec-Chr8:23880912 2.50E-50 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g515 . . . . Bpe02g00139 . . . . . Cma01g01646 . . . Sed05g1562 . Cpe07g00170 Bhi04g01382 Tan02g2480 Cmetu04g1739 . Hepe10g0431 . Lcy13g1480 . . . . . . . Cone4ag1297 Cone7ag0858 . . Lsi04g02279 Csa03g04492 . . . . Bda11g00799 . . . . . . Cmo01g01696 . . . . . . . . . . . . . . Cla11g01423 Cam11g1479 Cec11g1509 Cco11g1505 Clacu11g1640 Cmu11g1458 Cre11g1876 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009556 2 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32