Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1517 | ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACCCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTATATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATGCATCTTCAGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGTAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCGGCGAGGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTGGATAGACATAGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGGGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATCGCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTGTATGGGTATGAGATCAACTCAGTTGTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCGTCAGAGTCATATAATGCCATCCACTGGTGCTGATGCCTCCGAGGTGTTGAGTTCTGTTGGCACTGAATCTTTACATGAAAACAAAGTTGTCATTGAAGAAATATACCAAGAAGAGGCGGTTGTGGCGGGGATTTCGCTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGCCTCAAAGGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCGAAATATCTGACGCTTGAACCTTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCAGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTTTACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTCGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCGTTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCAGTTGATAGCCATGGGTGGAACGAATGCAGAATCTGCGTCGATGACTTTAGCGGAAGATCTGATGAGGTCTTACGAACATCAAGGATGTGAAATACTGTAA | 2853 | 46.62 | MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAISDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDASSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPARPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHRDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYRNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQACMGMRSTQLCVETKLSKECVRQSHIMPSTGADASEVLSSVGTESLHENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTASKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQQLIAMGGTNAESASMTLAEDLMRSYEHQGCEIL | 950 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29376439 | 29385637 | - | CePI673135_11g015170.1 | Cec11g1517 | 216729 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1517 | 950 | ProSitePatterns | Protein kinases ATP-binding region signature. | 661 | 682 | IPR017441 | GO:0005524(InterPro) | |
Cec11g1517 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 629 | 908 | IPR011009 | - | |
Cec11g1517 | 950 | FunFam | Serine/threonine-protein kinase CTR1 | 734 | 919 | - | - | |
Cec11g1517 | 950 | MobiDBLite | consensus disorder prediction | 29 | 55 | - | - | |
Cec11g1517 | 950 | CDD | STKc_MAP3K-like | 661 | 909 | - | - | |
Cec11g1517 | 950 | ProSiteProfiles | Protein kinase domain profile. | 655 | 913 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 776 | 788 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | SMART | serkin_6 | 655 | 913 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | Pfam | Protein tyrosine and serine/threonine kinase | 655 | 909 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | MobiDBLite | consensus disorder prediction | 110 | 139 | - | - | |
Cec11g1517 | 950 | FunFam | Serine/threonine-protein kinase isoform 1 | 645 | 733 | - | - | |
Cec11g1517 | 950 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 202 | 913 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec11g1517 | 950 | MobiDBLite | consensus disorder prediction | 110 | 137 | - | - | |
Cec11g1517 | 950 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 241 | 449 | - | - | |
Cec11g1517 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 734 | 921 | - | - | |
Cec11g1517 | 950 | PRINTS | Tyrosine kinase catalytic domain signature | 880 | 902 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | PRINTS | Tyrosine kinase catalytic domain signature | 770 | 788 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | PRINTS | Tyrosine kinase catalytic domain signature | 836 | 858 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | PRINTS | Tyrosine kinase catalytic domain signature | 729 | 742 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1517 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 648 | 732 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1612 | Cec-Chr1:30762998 | Cec11g1517 | Cec-Chr11:29376439 | 3.80E-120 | dispersed | |
Cec09g1458 | Cec-Chr9:22219160 | Cec11g1517 | Cec-Chr11:29376439 | 2.40E-40 | dispersed | |
Cec11g1164 | Cec-Chr11:23849824 | Cec11g1517 | Cec-Chr11:29376439 | 4.90E-42 | dispersed | |
Cec11g1300 | Cec-Chr11:27014399 | Cec11g1517 | Cec-Chr11:29376439 | 8.30E-48 | dispersed | |
Cec11g1517 | Cec-Chr11:29376439 | Cec08g1399 | Cec-Chr8:25803059 | 4.60E-35 | dispersed | |
Cec11g1517 | Cec-Chr11:29376439 | Cec10g1954 | Cec-Chr10:34337981 | 8.00E-173 | transposed | |
Cec11g1517 | Cec-Chr11:29376439 | Cec04g1129 | Cec-Chr4:30890404 | 8.00E-173 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72420 | PF07714 | PK_Tyr_Ser-Thr | 6.20E-64 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1517 | - | - | - | 0.0 |