Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1521 ATGTTTTTGCCTGAATTATCTGCTTTGTTAGACACCCTTGAACAGTCTGCTTGTAATCCGGAGGTTGCCATTGCTCTCTCTAAGAGCCTGCTCCGCATATTACAACTTTCATCTGAGAGAACTGTTGCTTCATTCAAGACACTGAATGTTGTTCCTCGGTTGCTTAAAGTTGCTTGTGTTCAAGCCCAGGAACATAGAAGATCTGGAAATGTTATTTCATCTGAGATTCATAATGTTGAAGACATTCAGTCTCAAAGTAATCAGGGACATGATTCACGGGAGACAGCCCAAAGTTGTCTTTCATGCTTGGAAACCATCATGGAGGTTTTCACAGAATTTTTCTCAATTGGAGACGAAGCTAAAAGTTTGGTTCTCCTTAATTCAACATCAATTGATTGTCTATTTGATTTATTTTGGGAAGAAAGTTTGAGAGGCCGTGTACTTAAACACACACTTGAGCTCATAAAGATAAAACCAATTTCTGAGGAAGATCAAAAGGCGAAATTGTATATTTGTACTAAATATCTTGAAATGTTTGCTCAAATTAAAGAGCGGGAGAAAAGTTCTACGGAGCTCTCTATTGATCTGTTGGTTGGAATCAGAGAGATGGTTCTGAATGATCCTCAGTACTACCAAACTCTGTTCTGTGATGGAGAATGCTTTTTGCATATTGTCTCTTTGTTGAATGGTAATGTCGATGAGGCAAATGGTGAAAAGTTGATTTTGAACGTCCTTCAAACTCTTACTTGTCTGCTAACTAAAAATGAAGTCTCAAAGAATCTTCACCAACTAAGGCTTCCAATAACAATTTCTTGTGTTGTTTTCTCTGAGGAAGAATTCCAAGAGCATCCAGCATTGACTCATCCAGTTCTACAGAAACATTGGGAGGCTTCATTTAGAGCTTTGGCTGGCAAAGGTTACCAGACAATGCAAACTTTGCTTTTGGACTTCTGTCAGTGCCATCCAAGTGATGCACTCTTAACTGCCTTGCTTGATATGCTTGTTGATGGAAATTTTGACTCGAAGTTGTGCCCTATTATCCAGAATGAAGACGTGATCATTCTTTATCTGAGTGTTCTGCAGAAGAGCAGTGAGCCACTGCAGCATCAAGGGCTTAATATGTTTCAACAGCTTCTTCGGGATTCTATATCCAATCGAGCGTCTTGTGTGAGAGCAGGAATGCTGACTTTTCTTCTGGATTGGTTTGGTCAAGATAACAACGACGATGTCATTGTGAAAATTGCTCAGTTAATTCAAGTAATAGGGGGGCATAGTGTATCTGGGAAGGATATCCGCAAAATTTTTGCTTTGTTAAGGAGTGAGAAAGTTGGGAAACAGAGACGTTATTGCTCATTGTTGCTGGCCAGTATTTTATCAATGCTAACTGAGAAGGGACCAACTGCTTTTTTTGATCTGAGTGGGAACAATTCTGGGATCTTAATTAAAACACCTGTTCAGTGGCCTCTCAATAAAGGATTTTCCTTTTCATGCTGGCTTCGGGTAGAGAACTTTCCAATACATGGAACAATGGGTCTTTTCAGCTTCCTTACTGAAAATGGAAGAGGCTGCTTGGCTGTGCTTGCAAAGAACAAGCTTATTTATGAGTCTATCAATCTGAGGAGACAGAGTGTCAGGTTACATGTTAATGTAGTCAGAAAGAAGTGGCATTTTCTTTGTATAACCCATAGTATTGGAAGAGCATTCTCTGGGGGTAGCTTGTTGAGGTGTTATGTGGACGGTGATCTTGTTTCATCTGAGAGATGCAGATATGCTAAAGTTAATGAACCACTAACAAATTGCACGGTTGGAGCAAAGTTCAATGTGTCTCTGAGTGAAGAAGTTGATACTAAGGAATCTGTTGAAGCTGCATTTCCTTTTCTTGGTCAGATAGGTCCTGTTTATTTGTTTAATGATGCTATTTCTTCTGAGCAAGTGCAGGGTATTCATTCTCTTGGACCAAGCTATATGTATTCATTTCTTGACAATGACATTGCTACTTTCTCTGAAAATCAATTGCCTAGAGGAATTCTTAATGCTAAAGAGAGTTTGGCATCAAAAATAATCTTCGGCCTTAATGCACAGGCAAGCAGTGGAAAATCATTATTTAATGTTTCACCAACGTTAGATCTCACTTTGGAAAAGAATTCTTTTCAAGCTACTGCTATGGGTGGCACAGAGTTATGCTCAAGACGCTTACTACAGCGGATTATCTACTGTGTTGGGGGTGTCACTGTACTTTTTCCTCTAATTTCTCAGTCTGACAGATATGAAAGTGAAAGTAATGGTCAGGATGTGGATGTAATTGGTACCAAAGAGTGTCTAACAGCTGAAGTTATTGAACTTATTGCTTCTGTCCTTGATGAGAATTTACCAAATCAACATCAGATGAATCTCCTTTCTGGATTCTCCATTCTGGGATTTTTGCTGCAATCGGTCAATCCACAACAACTTAATATGGAAACTCTTGCAGCTTTAAAACATCTTTTCAATGTCATTGCAAACTGTGGATTCTGTGAGCTTCTCATTCAAGATGCTATATCTAGCATATTTCTTAATCTCTCAATCTGGATCTACTCTGCTTATGAGGTGCAGCGTGAATTATACTTGTTTCTGATTCAGCAGTTTGATAATGATCCCAGACTGCTCAAGAATCTTTGCCGCCTTCCACTTATTCTTGATATGATTTGTAAGTTTTACTGTGACAAAGCTAAATGTAAATTTGCTTCTGGAAGCAAGACTTCTCTGCATCCACCTGTTGAAGCTCTTGGAGAAAGACCTACTAAGGATGAAATTCGGAAAATTCGTCTTCTTTTACTAAGCCTTGGGGAAATGAGCATTGGGCAAAATATTGTAGCAGCTGATATAAAAGCTCTTATTGCTTTTTTTGAAAGAAACCAGGATGTGACATGCATCGAGGATGTTTTGCATATGGTTATTCGGGCTATAGCTCAAAAGACAGTTCTTGCTTCTTTCCACGAGCAAGTTAATTTCATTGGTGGCTGTCCAATTTTTGTCAATCTTCTACAAAGGGAATTTGAACCTATCAGATTGCTTAGCTTGCAGTTCCTTGGTAGACTTTTGGTCGGTCTTCCTTCCGAGAAGAAAGGACTGAGATTTTTCAATCTCCCAAGTGGAAAAGCTAAATCTGTTCAAGATAGCAATAAGAAAACTAGTTTAAGGATGCAACCACTATTCTCAGCTATATCTGATAGGTTGTTTAGGTTTCCACCAACAGACAATTTATGTGCTGCATTGTTTGATGTTCTTCTTGGGGGTGCAAGTCCCAAACAGGTATTGCAGAAACAAAATCAGTCTGATGGACAAAGAAACAAATCTCCTGGATCTCACTTTGCTGTTCCACAGAGTTTAGTGCTTATTTTCCAGTTCCTATGTAGCTGTGAGGATATTTCTGCAAGACTAAAAATAATTACAGATCTTCTTGATCTTCTTGAGACAAATCCTTCAAATATTGAAGCTTTTATGGAATATGGGTGGAATGCTTGGTTGACAGCCTGTGTCAAGCTTGATGCTTTGCAGCAATACAAAGTTGGGTCATTAGATCAAGTTGATGATAAAATAAATGAGCAGCGTATTATAAGGAAACTATTTTCTGTTGTTCTTTTGCATTGCATATGGTCAGTGAAGGGTGGCTGGCAACAATTAGAAGAAACAGCAACTTTCCTTCTTATGCAGTCTGAGAAAGGCCAGGTCTCCTTTAAGTACTTTCTTCGTGATATGTATGAGGATCTTATTCAGATGTTAGTGGATTTATCTTCTGGGGAGAATATATTTGTTGCACAACCATGTCGAGATAATACGTTATACCTTCTAAGGCTCATTGATGACATGCTTATAGCTGAACTTGACCATCAGTTGCCGATTCTAGCGACTGTCTTTGATGTTTCTCTCGACTCCACAGAACTGGAGCTTTACATCTCTGCCTTACATGATGTTTTGCAAGGAGAATATGATGACGGGACCACAAGGTACTCCTCTCTCCTTCCCCATTCTCCGCCCCTCCTTTCTGTCTCCAAAGAAGTCAAGAAAGAAGACGTAATAATAGGAGGTAATTTTGGCAAAGAAGAAGACAACCATGGGCAACTCGATTTGAAGAAGTTCGAATCTTTGGTTGCAGCTGATTGTTTGGAAGACAATGAGGAAGAATACTTGGAAACACATGATCCACCCGAACCGACCCAAGTGATTCGACCCAACATGTGTGCTCAATTCCTAGCATGTGTTTCATGCAATCAACCTGGGTTCAGTCTTTCCAATTTCAATTTGCTGCCTCCCTTTCTGTGA 4302 39.38 MFLPELSALLDTLEQSACNPEVAIALSKSLLRILQLSSERTVASFKTLNVVPRLLKVACVQAQEHRRSGNVISSEIHNVEDIQSQSNQGHDSRETAQSCLSCLETIMEVFTEFFSIGDEAKSLVLLNSTSIDCLFDLFWEESLRGRVLKHTLELIKIKPISEEDQKAKLYICTKYLEMFAQIKEREKSSTELSIDLLVGIREMVLNDPQYYQTLFCDGECFLHIVSLLNGNVDEANGEKLILNVLQTLTCLLTKNEVSKNLHQLRLPITISCVVFSEEEFQEHPALTHPVLQKHWEASFRALAGKGYQTMQTLLLDFCQCHPSDALLTALLDMLVDGNFDSKLCPIIQNEDVIILYLSVLQKSSEPLQHQGLNMFQQLLRDSISNRASCVRAGMLTFLLDWFGQDNNDDVIVKIAQLIQVIGGHSVSGKDIRKIFALLRSEKVGKQRRYCSLLLASILSMLTEKGPTAFFDLSGNNSGILIKTPVQWPLNKGFSFSCWLRVENFPIHGTMGLFSFLTENGRGCLAVLAKNKLIYESINLRRQSVRLHVNVVRKKWHFLCITHSIGRAFSGGSLLRCYVDGDLVSSERCRYAKVNEPLTNCTVGAKFNVSLSEEVDTKESVEAAFPFLGQIGPVYLFNDAISSEQVQGIHSLGPSYMYSFLDNDIATFSENQLPRGILNAKESLASKIIFGLNAQASSGKSLFNVSPTLDLTLEKNSFQATAMGGTELCSRRLLQRIIYCVGGVTVLFPLISQSDRYESESNGQDVDVIGTKECLTAEVIELIASVLDENLPNQHQMNLLSGFSILGFLLQSVNPQQLNMETLAALKHLFNVIANCGFCELLIQDAISSIFLNLSIWIYSAYEVQRELYLFLIQQFDNDPRLLKNLCRLPLILDMICKFYCDKAKCKFASGSKTSLHPPVEALGERPTKDEIRKIRLLLLSLGEMSIGQNIVAADIKALIAFFERNQDVTCIEDVLHMVIRAIAQKTVLASFHEQVNFIGGCPIFVNLLQREFEPIRLLSLQFLGRLLVGLPSEKKGLRFFNLPSGKAKSVQDSNKKTSLRMQPLFSAISDRLFRFPPTDNLCAALFDVLLGGASPKQVLQKQNQSDGQRNKSPGSHFAVPQSLVLIFQFLCSCEDISARLKIITDLLDLLETNPSNIEAFMEYGWNAWLTACVKLDALQQYKVGSLDQVDDKINEQRIIRKLFSVVLLHCIWSVKGGWQQLEETATFLLMQSEKGQVSFKYFLRDMYEDLIQMLVDLSSGENIFVAQPCRDNTLYLLRLIDDMLIAELDHQLPILATVFDVSLDSTELELYISALHDVLQGEYDDGTTRYSSLLPHSPPLLSVSKEVKKEDVIIGGNFGKEEDNHGQLDLKKFESLVAADCLEDNEEEYLETHDPPEPTQVIRPNMCAQFLACVSCNQPGFSLSNFNLLPPFL 1433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29448038 29477969 + CePI673135_11g015210.1 Cec11g1521 216733

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1521 1433 Pfam Concanavalin A-like lectin/glucanases superfamily 474 646 - -
Cec11g1521 1433 SUPERFAMILY Concanavalin A-like lectins/glucanases 465 653 IPR013320 -
Cec11g1521 1433 PANTHER BEIGE/BEACH-RELATED 2 1311 IPR050865 -
Cec11g1521 1433 SUPERFAMILY ARM repeat 8 424 IPR016024 -
Cec11g1521 1433 SUPERFAMILY ARM repeat 314 460 IPR016024 -
Cec11g1521 1433 Pfam Neurobeachin/BDCP, DUF4704 alpha solenoid region 713 1229 IPR031570 -
Cec11g1521 1433 Pfam Neurobeachin alpha solenoid region 3 260 IPR046852 -
Cec11g1521 1433 Pfam Neurobeachin alpha solenoid region 297 461 IPR046852 -
Cec11g1521 1433 Gene3D - 463 661 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1521 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0871 Cec-Chr1:9994602 Cec11g1521 Cec-Chr11:29448038 1.50E-23 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g530 . Blo12g00736 . Bda03g00451 . Bpe04g00414 . . . . Cma01g01471 . . . . . . . . . . . . . . . . . . . . Cone4ag1289 . . . Lsi04g02285 Csa03g04501 Chy04g00200 . . . . . . . . . . Cmo01g01527 . . . . . . Cpe02g00481 Bhi09g02508 . . . Hepe01g2176 Mch11g0715 . Cla11g01433 Cam11g1487 Cec11g1521 Cco11g1517 Clacu11g1649 Cmu11g1467 Cre11g1885 . . . Cme04g00231
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003187 1 6 2 1 1 0 2 0 2 1 2 1 1 1 1 1 2 1 2 2 1 1 1 1 3 1 1 2 2 1 44