Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1567 GCGTCGTCTTCGCTTTCTGTGGGGATGATGGCTGTTACCTCCGCCTGCAAGGACGCTGCTAGCAAGATGAGCAGCTTGGATAATGGGAAGTACGTTAGGTACACACCAGAGCAAGTGGAAGCCCTTGAGAGGCTTTATTATGAATGCCCAAAACCCAGTTCTATGCGCCGCCAGCAGCTTATCAGGGAATGCCCAATTCTCTCCAATATCGAACCAAAGCAGATCAAAGTTTGGTTTCAAAATCGGAGATGTAGAGAGAAGCAGAGGAAGGAGGCATCACGACTCCAGACTGTGAACAGGAAGCTTACGGCTATGAATAGACTCCTGATGGAGGAAAATGATAGGTTGCAGAAACAGGTGTCACAACTTGTGTATGAGAACAGCTATTTTCGTCAACATACGCAGAATGCGACCTTAGCCACCACTGACACAAGTTGCGAGTCAGTGGTGACAAGTGGTCAACAGAATTTGACTCCGCCGCATCCACCAAAGGATGCCAGCCCCGCAGGACTTTTGTCCATTGCGGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGATGCACTGGAGTTGCTGCTCGTGCATGTGGACTTGTGGGTCTCGAACCTACAAGAGTGGCTGAAATTCTTAAAGATTGGCCTTCTTGGTTTCGAGATTGCCGTGCCATTGATGTTCTAAACGTCCTATCTACTGGAAATGGAGGAACCATTGAGCTTCTATATATGCAGCTCTATGCACCTACTACTTTGGCACCTGCTCGTGATTTCTGGCTGCTGCGATACACATCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAGAGATCTCTTAACAATACTCAGAATGGTCCAAGTATGCCTACAGTCCAGAACTTTGTAAGAGCAGAAATGCTACCAAGTGGCTATTTGATAAGACCTTGTGAAGGTGGTGGATCAATAATCCATATAGTTGATCACATGGACTTAGAACCTTGGAGTGTACCTGAAGTGTTGCGGCCATTATACAAGTCATCTACTCTGCTTGCTCAGAAGAACACAATGGCAGCATTACGCTTGCTGAGACAGATTTCACAAGAAGTTTCTCAACCAAATGTTACTGGTTGGGGAAGAAGACCTGCTGCACTTCGTGCTCTTAGCCAAAAATTGAGCAGAGGTTTCAATGAAGCAGTTAATGGGTTTACAGACGAGGGATGGTCTTTGTTAGAAAATGATGGCATTGATGATGTTACACTTCTTGTAAACATGTCTCATGGCAAGACAATGATGGGTGCAAATATTTCATATTCTAATGGCTTCCCATCCATGAGCAACGCAGTGCTTTGTGCCAAAGCGTCGATGTTATTACAGAATGTTACTCCAGCAATGCTCATCAGGTTCTTAAGAGAACACCGGTCAGAATGGGCAGACAGTAGTATTGATGCTTACTCAGCAGCAGCAATTAAGACCGGTCAGTGTGGTTTACCAGGGTCTCATGCTGGAACTTTTGGGGGTCAGGTTATTCTTCCCTTGGCACAAACAGTTGAGCATGAAGAGTTTATGGAAGTTGTTAAATTTGAAAACGTGGGCCACTATAGGGATGATATGCTCATGCCTGGTGACATCTTCCTTCTCCAACTTTGCAATGGTGTGGAGGAGAATGCAGTTGGTACGTCCGCTGAACTCATCTTTGCTCCAATTGATGCCTCCTTTTCTGATGATGCACCAATTCTACCATCTGGCTTCCGCATCATTCCACTCGATTCTGGGATGGATGCTTCAAGTCCAAACCGCACACTTGATCTTGCTTCAGCTCTTGATGTTGGACCTGCAGGGAATAGAACTTCTGCTGATTGTGCTGGTCAATCAGGAAATTCAAAATCTGTGATGACAATTGCATTCCAATTTGTATTTGATGTTCACCTTCAAGATAATGTAGCCGCAATGGCACGACAGTATGTCAGGAGCATTATAGCATCTGTCCAGAGGGTGGCACTGGCTCTTTCCCCTTCGAATTTCGGTCCTCATGCTAACCTTCAGACACCAGCTGGTGCTCCTGAAGCACAGACGCTTGCTCGTTGGATCTCTCAAAGCTATAGGTGCTATATGGGCATGGAGTTACTGAAGAATGAAGGAAGAGAATCCGTTCTCAAATCCCTTTGGCATCACTCAGATGCAGTCATGTGCTGCTCTTTGAAGGCATTGCCAAATTTTACATTTGCAAATCAATCTGGACTTGACATGCTTGAGACAACCTTGGTGGCTCTCCAAGACATTACTCTGGAGAAGATTTTTGATGACAATGGAAAGAAAACTTTAGCCTCAGAGTTCCCACGGATAATGCAGCAGGGCTTCCTTTGTCTTCAAGGGGGTGTCTGCTTATCAAGCATGGGAAGGGCAGTGTCCTATGAGAAAGCTGTGGCATGGAAGGTTTTGAATGAAGAAGAAAACGCCCACTGTATTTGCTTCATGTTTATGAACTGGTCTTTTGTTTGA 2553 45.67 ASSSLSVGMMAVTSACKDAASKMSSLDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLVYENSYFRQHTQNATLATTDTSCESVVTSGQQNLTPPHPPKDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDWPSWFRDCRAIDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPTVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYKSSTLLAQKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLENDGIDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFENVGHYRDDMLMPGDIFLLQLCNGVEENAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDASSPNRTLDLASALDVGPAGNRTSADCAGQSGNSKSVMTIAFQFVFDVHLQDNVAAMARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWISQSYRCYMGMELLKNEGRESVLKSLWHHSDAVMCCSLKALPNFTFANQSGLDMLETTLVALQDITLEKIFDDNGKKTLASEFPRIMQQGFLCLQGGVCLSSMGRAVSYEKAVAWKVLNEEENAHCICFMFMNWSFV 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29969433 29976467 - CePI673135_11g015670.1 Cec11g1567 216779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1567 850 Gene3D - 208 384 IPR023393 -
Cec11g1567 850 SUPERFAMILY Homeodomain-like 29 92 IPR009057 -
Cec11g1567 850 Pfam MEKHLA domain 709 849 IPR013978 -
Cec11g1567 850 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 22 850 IPR044830 GO:0003700(InterPro)
Cec11g1567 850 Pfam START domain 174 382 IPR002913 GO:0008289(InterPro)
Cec11g1567 850 CDD START_ArGLABRA2_like 168 383 - -
Cec11g1567 850 FunFam homeobox-leucine zipper protein ATHB-15 209 390 - -
Cec11g1567 850 Gene3D - 22 96 - -
Cec11g1567 850 SUPERFAMILY Bet v1-like 173 383 - -
Cec11g1567 850 SMART HOX_1 27 93 IPR001356 GO:0003677(InterPro)
Cec11g1567 850 ProSiteProfiles START domain profile. 164 378 IPR002913 GO:0008289(InterPro)
Cec11g1567 850 SMART START_1 173 383 IPR002913 GO:0008289(InterPro)
Cec11g1567 850 Pfam Homeodomain 30 88 IPR001356 GO:0003677(InterPro)
Cec11g1567 850 FunFam Homeobox-leucine zipper protein REVOLUTA 30 85 - -
Cec11g1567 850 Coils Coil 99 126 - -
Cec11g1567 850 ProSiteProfiles 'Homeobox' domain profile. 25 89 IPR001356 GO:0003677(InterPro)
Cec11g1567 850 CDD bZIP 82 121 - -
Cec11g1567 850 CDD homeodomain 30 90 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g1567 Cec-Chr11:29969433 Cec09g0010 Cec-Chr9:98163 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30559 PF01852 START 5.50E-54 CL0209 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1567 K09338 - csv:101218438 1660.97