Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1573 | ATGTCAACAAAGGAAGAATCTCAAATTTCCCAACATTCTTCCAATAACAATCAATCCAAACCCAACAAGCGCCTTCATGCTGATTCCAGCAAGCACCCAATGTATCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCACGCAAGAAATCCCGCATTTGGCTCGGGACTTTCCCCACCCCTGAAATGGCCGCTCGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCCATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCTGTTTCCTTCGCCCCTCGCGACGTTCAAGCCGCCGCCGCCAAGGCCGCCCATATGGACCCTAATTTCCTCCACTACTCTCCTAATTCCCCTGTTTCCACTTCCCCATCCCCCTCCTCCGCCGCCGACGACGACTCCGACGAACTCACCGAAATCGTCAAACTCCCTACTCTCGGCTCCAACTACGATCACTTCATCTCTAACAACGAGTTCGTGCTGATGGACTCGACGGAGGGATGGGTTTATCCCCCGCCTTGGTTACGAACCATGGAGGATTGCGGCTACAATACCAACAATATTATTGACGATTTGGGAATTGGGGTTGGGGATAGTAATTGCTTATGGGATTATTAA | 651 | 52.84 | MSTKEESQISQHSSNNNQSKPNKRLHADSSKHPMYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPNFLHYSPNSPVSTSPSPSSAADDDSDELTEIVKLPTLGSNYDHFISNNEFVLMDSTEGWVYPPPWLRTMEDCGYNTNNIIDDLGIGVGDSNCLWDY | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30021244 | 30021894 | - | CePI673135_11g015730.1 | Cec11g1573 | 216785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1573 | 216 | MobiDBLite | consensus disorder prediction | 125 | 142 | - | - | |
Cec11g1573 | 216 | PRINTS | Ethylene responsive element binding protein signature | 57 | 73 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | PRINTS | Ethylene responsive element binding protein signature | 35 | 46 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | SUPERFAMILY | DNA-binding domain | 34 | 92 | IPR016177 | GO:0003677(InterPro) | |
Cec11g1573 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 34 | 91 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | Gene3D | AP2/ERF domain | 34 | 92 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | Pfam | AP2 domain | 34 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | CDD | AP2 | 35 | 93 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 16 | 174 | IPR051032 | - | |
Cec11g1573 | 216 | FunFam | Ethylene-responsive transcription factor 2 | 33 | 92 | - | - | |
Cec11g1573 | 216 | SMART | rav1_2 | 34 | 97 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec11g1573 | 216 | MobiDBLite | consensus disorder prediction | 124 | 146 | - | - | |
Cec11g1573 | 216 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cec11g1573 | 216 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0984 | Cec-Chr6:14046733 | Cec11g1573 | Cec-Chr11:30021244 | 1.90E-47 | dispersed | |
Cec07g1443 | Cec-Chr7:30028836 | Cec11g1573 | Cec-Chr11:30021244 | 5.60E-39 | dispersed | |
Cec09g0183 | Cec-Chr9:1640324 | Cec11g1573 | Cec-Chr11:30021244 | 5.40E-42 | dispersed | |
Cec10g1944 | Cec-Chr10:34254389 | Cec11g1573 | Cec-Chr11:30021244 | 6.60E-24 | dispersed | |
Cec10g1945 | Cec-Chr10:34263210 | Cec11g1573 | Cec-Chr11:30021244 | 2.80E-26 | dispersed | |
Cec11g0235 | Cec-Chr11:2512522 | Cec11g1573 | Cec-Chr11:30021244 | 5.30E-39 | dispersed | |
Cec11g1573 | Cec-Chr11:30021244 | Cec11g1617 | Cec-Chr11:30445455 | 6.10E-20 | dispersed | |
Cec06g0252 | Cec-Chr6:2742331 | Cec11g1573 | Cec-Chr11:30021244 | 1.60E-32 | transposed | |
Cec10g0252 | Cec-Chr10:2843932 | Cec11g1573 | Cec-Chr11:30021244 | 7.60E-37 | transposed | |
Cec11g1573 | Cec-Chr11:30021244 | Cec08g1260 | Cec-Chr8:24584472 | 9.70E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30561 | PF00847 | AP2 | 8.00E-14 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1573 | K09286 | - | csv:101217333 | 275.789 |