Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1573 ATGTCAACAAAGGAAGAATCTCAAATTTCCCAACATTCTTCCAATAACAATCAATCCAAACCCAACAAGCGCCTTCATGCTGATTCCAGCAAGCACCCAATGTATCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCACGCAAGAAATCCCGCATTTGGCTCGGGACTTTCCCCACCCCTGAAATGGCCGCTCGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCCATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCTGTTTCCTTCGCCCCTCGCGACGTTCAAGCCGCCGCCGCCAAGGCCGCCCATATGGACCCTAATTTCCTCCACTACTCTCCTAATTCCCCTGTTTCCACTTCCCCATCCCCCTCCTCCGCCGCCGACGACGACTCCGACGAACTCACCGAAATCGTCAAACTCCCTACTCTCGGCTCCAACTACGATCACTTCATCTCTAACAACGAGTTCGTGCTGATGGACTCGACGGAGGGATGGGTTTATCCCCCGCCTTGGTTACGAACCATGGAGGATTGCGGCTACAATACCAACAATATTATTGACGATTTGGGAATTGGGGTTGGGGATAGTAATTGCTTATGGGATTATTAA 651 52.84 MSTKEESQISQHSSNNNQSKPNKRLHADSSKHPMYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPNFLHYSPNSPVSTSPSPSSAADDDSDELTEIVKLPTLGSNYDHFISNNEFVLMDSTEGWVYPPPWLRTMEDCGYNTNNIIDDLGIGVGDSNCLWDY 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30021244 30021894 - CePI673135_11g015730.1 Cec11g1573 216785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1573 216 MobiDBLite consensus disorder prediction 125 142 - -
Cec11g1573 216 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677(InterPro)
Cec11g1573 216 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 Pfam AP2 domain 34 83 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 CDD AP2 35 93 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 174 IPR051032 -
Cec11g1573 216 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Cec11g1573 216 SMART rav1_2 34 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g1573 216 MobiDBLite consensus disorder prediction 124 146 - -
Cec11g1573 216 MobiDBLite consensus disorder prediction 1 23 - -
Cec11g1573 216 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0984 Cec-Chr6:14046733 Cec11g1573 Cec-Chr11:30021244 1.90E-47 dispersed
Cec07g1443 Cec-Chr7:30028836 Cec11g1573 Cec-Chr11:30021244 5.60E-39 dispersed
Cec09g0183 Cec-Chr9:1640324 Cec11g1573 Cec-Chr11:30021244 5.40E-42 dispersed
Cec10g1944 Cec-Chr10:34254389 Cec11g1573 Cec-Chr11:30021244 6.60E-24 dispersed
Cec10g1945 Cec-Chr10:34263210 Cec11g1573 Cec-Chr11:30021244 2.80E-26 dispersed
Cec11g0235 Cec-Chr11:2512522 Cec11g1573 Cec-Chr11:30021244 5.30E-39 dispersed
Cec11g1573 Cec-Chr11:30021244 Cec11g1617 Cec-Chr11:30445455 6.10E-20 dispersed
Cec06g0252 Cec-Chr6:2742331 Cec11g1573 Cec-Chr11:30021244 1.60E-32 transposed
Cec10g0252 Cec-Chr10:2843932 Cec11g1573 Cec-Chr11:30021244 7.60E-37 transposed
Cec11g1573 Cec-Chr11:30021244 Cec08g1260 Cec-Chr8:24584472 9.70E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30561 PF00847 AP2 8.00E-14 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1573 K09286 - csv:101217333 275.789