Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1587 ATGGAGGCTCAAAACCTTGCTAGTGATGAATCTGTTTCCTCAGGGCCTTGTATGGATTTTCACCTCAACTTCAACAACATTCAAAATAACCATGAAACTACTTCTGCCAATTCCTCTAATGTGGGATTGGGATTATTGGGAGAAAATGGAGAAGATGGGGCAGTTCATTTACAACAAGAAAGCTACCATCAAATCCATCCAAATAGTCATCCAAATACTTCACCCATTGAGGAATTGTTTTTGCTGCAGTTCCCACCAACAAATTTGCCGTATCATGATGATCAACCTGCAGAACCAAAATTCAATAGAAAGAGAGCTCGAGATGGTGGTCTAATGCATGGTATCGTTAGAGAGGATTCATCGTCGCAGCCTTCTATACGCATCAAGGGTGGAATTGGGAATTGTGGGAGAATGAAGAATCAATCCATTGCTAAGAAGAAAAATCCATCCGATGGCAGGCTTACAAACTCGGTTTATGATATAACGTTTGAAGAAGTTGGTCTACCAATCGATCCTCATCTTCGTGATAAATTGACAGCAAAAACGAGTGACAAGAGAGAGAATTCAGCTGATGAGGAAGTTGAAACAAAAGAGATGGATGATAGAAGTTTGACTCCAGATAATCAACCACAGGATGAGCGATACATTCACAAAGTTGGGGTTCCACCCAAGCAAAAACTTTACAAAGAAATCAAATCTGCAGTGAAAGAAACATTTTTCCCGGATGATCCTCTCCGTTCATTCAAGGATCAAACTAAGAGGCGGAAATTTATTCTCGGGGTCCAAGCCGTTTTTCCGATTCTTGATTGGGGAAGAACCTATAATTTGACTAAGTTTAGAGGAGATGTTATTTCTGGATTAACAATTGCTAGTCTTTGCATTCCACAGGATATTGGGTATGCCAAGCTTGCGAATTTGCCTCCAGAGTACGGTTTGTACTCCAGTTTTGTTCCACCATTAATCTATGCACTTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACGCTGATTCAAGCGGAAATCGATTCTGCTGCGAATCCAGAAGACTACAGGCGGCTGGCATTTACAGCTACATTCTTTGCGGGGATCACACAAGCCACCCTTGGAGTTCTGAGGTTGGGATTCCTTATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAGCAACTCAAAGGCTTTCTTGGCATCAAGAAATTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCAGTATTTGGCACAATCCGACACGGATGGAACTGGCAGACAATAGTGATTGCTGTAGCCTTCCTTGGCTTCCTTCTATTTGCAAAGTTCATTGGGAAGAAGAACAAGAGGCTCTTCTGGGTGCCTGCAATTGCTCCACTTATATCTGTTGTACTGTCTACCATTTTGGTATACATTACTCGTGCAGATAAGGAAGGAGTTGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCCCATCTGTGAAAGACTTATATTTATCAGGCCAATACCTTCCAAAAGGGTTGAAGATCGGTATTGTTGCAGGAATGGTAGCACTGACGGAAGCCGTTGCAATTGGAAGAACGTTTGCTTCAATGAAAGACTATCAAATAGATGGGAACAAGGAAATGGTAGCAATGGGACTCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAACAACAGGATCATTCTCTAGATCCGCCGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCCAACATTGTGATGTCTATTGTAGTACTCCTAACTTTGGCATTCCTCACCCCATTGTTCAAATATACTCCAAATGCAATTCTGTCCGCTATCATCATATCCGCTGTGATCAACCTGGTCGACTTGCATGCTGCGAAACTGATTTGGAAGATAGATAAATTCGATTTTGTTGCTTGTATGGGAGCCTTCCTTGGTGTCATCTTTTTCTCTGTTGAGATAGGCCTTCTTATTGCGGTATCCATTTCCTTCGCCAAAATCCTTCTACAAGTTACCAGGCCAAGGACTGCAATTCTTGGAAAGATCCCGAGGACGACTGTTTACCGAAACATACTGCAATATCCTGAAGCAACCCAGGTTCCAGGGGTTTTGATTGTGAGAGTTGATTCGGCAATTTACTTTTCCAACTCCAATTACATCAAGGAAAGGATATTGAGATGGCTGGTTGATGAGGAAGAACAAACGAAAAAGTTATACCAGAACAAAATCCAGTTTCTAATAGTTGAAATGTCTCCTGTTACTGACATAGACACTAGTGGCATACATGCTTTGGAAGAGCTAAATGGGAGTCTCAAGAAGAGAGAAATTCAGCTCATTTTAGCAAATCCGGGGCCCGTGGTGATCAACAAACTCCACGCATCGGAATTTGTAGATTTGATAGGCCAAGACCATATCTTCCTCACAGTTGCAGATGCAGTCTCATCTTGTAGTCCAAAGATAATGAACGACGTTTGA 2529 42.15 MEAQNLASDESVSSGPCMDFHLNFNNIQNNHETTSANSSNVGLGLLGENGEDGAVHLQQESYHQIHPNSHPNTSPIEELFLLQFPPTNLPYHDDQPAEPKFNRKRARDGGLMHGIVREDSSSQPSIRIKGGIGNCGRMKNQSIAKKKNPSDGRLTNSVYDITFEEVGLPIDPHLRDKLTAKTSDKRENSADEEVETKEMDDRSLTPDNQPQDERYIHKVGVPPKQKLYKEIKSAVKETFFPDDPLRSFKDQTKRRKFILGVQAVFPILDWGRTYNLTKFRGDVISGLTIASLCIPQDIGYAKLANLPPEYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGTLIQAEIDSAANPEDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMQSVFGTIRHGWNWQTIVIAVAFLGFLLFAKFIGKKNKRLFWVPAIAPLISVVLSTILVYITRADKEGVAIVKHIEKGINPPSVKDLYLSGQYLPKGLKIGIVAGMVALTEAVAIGRTFASMKDYQIDGNKEMVAMGLMNVVGSMTSCYVTTGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLAFLTPLFKYTPNAILSAIIISAVINLVDLHAAKLIWKIDKFDFVACMGAFLGVIFFSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNILQYPEATQVPGVLIVRVDSAIYFSNSNYIKERILRWLVDEEEQTKKLYQNKIQFLIVEMSPVTDIDTSGIHALEELNGSLKKREIQLILANPGPVVINKLHASEFVDLIGQDHIFLTVADAVSSCSPKIMNDV 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30181370 30191379 + CePI673135_11g015870.1 Cec11g1587 216799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1587 842 FunFam Sulfate transporter 31 691 837 - -
Cec11g1587 842 SUPERFAMILY SpoIIaa-like 713 835 IPR036513 -
Cec11g1587 842 Pfam Sulfate permease family 279 660 IPR011547 GO:0016020(InterPro)
Cec11g1587 842 PANTHER SULFATE TRANSPORTER 235 834 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec11g1587 842 CDD STAS_SulP_like_sulfate_transporter 712 827 - -
Cec11g1587 842 Coils Coil 747 767 - -
Cec11g1587 842 NCBIfam sulfate permease 266 830 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec11g1587 842 MobiDBLite consensus disorder prediction 119 138 - -
Cec11g1587 842 Gene3D STAS domain 691 837 IPR036513 -
Cec11g1587 842 ProSitePatterns SLC26A transporters signature. 308 329 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cec11g1587 842 ProSiteProfiles STAS domain profile. 711 834 IPR002645 -
Cec11g1587 842 MobiDBLite consensus disorder prediction 177 214 - -
Cec11g1587 842 Pfam STAS domain 712 830 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0888 Cec-Chr3:11372604 Cec11g1587 Cec-Chr11:30181370 2.20E-302 dispersed
Cec07g1036 Cec-Chr7:25138568 Cec11g1587 Cec-Chr11:30181370 1.20E-180 dispersed
Cec11g0134 Cec-Chr11:1561254 Cec11g1587 Cec-Chr11:30181370 3.40E-186 dispersed
Cec09g1649 Cec-Chr9:29984451 Cec11g1587 Cec-Chr11:30181370 1.50E-247 transposed
Cec09g2121 Cec-Chr9:38189550 Cec11g1587 Cec-Chr11:30181370 4.80E-109 transposed
Cec11g1587 Cec-Chr11:30181370 Cec03g0885 Cec-Chr3:11312720 5.80E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1587 K17470 - csv:101207370 1196.42