Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1619 ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCCTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTCGCCGTTTATCGACACGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCGAAGATGACATTCCCAATCTTTGCACGAATATTGCTCCTCGGCTTTCTCGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAATTTGAAGAAGATTCGTAGCATCGCGAAGGTAGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCAGAGCACTGAGTCTGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCGTATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCTTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACGAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCACCGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA 1131 49.51 MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNLKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHQSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAFLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATATAERCSSKAPPA 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30471817 30474702 + CePI673135_11g016190.1 Cec11g1619 216831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1619 376 PANTHER WAT1-RELATED PROTEIN 21 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec11g1619 376 MobiDBLite consensus disorder prediction 349 368 - -
Cec11g1619 376 MobiDBLite consensus disorder prediction 349 376 - -
Cec11g1619 376 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020(InterPro)
Cec11g1619 376 Pfam EamA-like transporter family 23 149 IPR000620 GO:0016020(InterPro)
Cec11g1619 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Cec11g1619 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g1317 Cec-Chr11:27348486 Cec11g1619 Cec-Chr11:30471817 7.00E-56 dispersed
Cec11g1619 Cec-Chr11:30471817 Cec11g1652 Cec-Chr11:30832818 1.30E-36 dispersed
Cec01g1112 Cec-Chr1:17228052 Cec11g1619 Cec-Chr11:30471817 1.60E-53 transposed
Cec02g1558 Cec-Chr2:33181021 Cec11g1619 Cec-Chr11:30471817 6.10E-60 transposed
Cec04g0647 Cec-Chr4:25239175 Cec11g1619 Cec-Chr11:30471817 3.90E-98 transposed
Cec06g0704 Cec-Chr6:8005190 Cec11g1619 Cec-Chr11:30471817 2.40E-69 transposed
Cec06g0901 Cec-Chr6:12157871 Cec11g1619 Cec-Chr11:30471817 4.70E-71 transposed
Cec06g1164 Cec-Chr6:23082986 Cec11g1619 Cec-Chr11:30471817 5.90E-58 transposed
Cec10g1660 Cec-Chr10:31079733 Cec11g1619 Cec-Chr11:30471817 2.50E-96 transposed
Cec11g1365 Cec-Chr11:27912721 Cec11g1619 Cec-Chr11:30471817 1.80E-92 transposed
Cec11g1619 Cec-Chr11:30471817 Cec08g0581 Cec-Chr8:17235107 8.00E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1619 - - - 0.0