Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1632 ATGGCGGAGATAGCGGTATTCGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAAACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAGAATCTGTTGAAATTGGTTTGTGAAAACGAAGAAGAGATGGTTCAAACCGTTCATTCCGATCTTTATAAACCCGAATTTGAAGCCTTCGCTCATGAGATAGCTCTATTAAAAGGTTCGTGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGGAGCAATTGTTCCAGAACCTTTCGGTGTCGTCCTTATCATTTCTGCTTGGAATTATCCATTCTTGTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAAGAACATCATCTTTGATGGCAAAACTTTTGGCGAAATATTTGGATACATCTGCTGTAAAAGTTGTTGAGGGTGCTGTTCCCGAAACTAATGCTTTGCTGGAGCGGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGGATAGTGATGGCAGCTGCTGCCAAGCATCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATAGCTGGCAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGATTATATCATAACACCGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTTAAACAAGAATTGGAGAGATTTTATGGAAAGAATCCGTTGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAAACACTTTGATCGCTTGACAAGGCTCTTAGATGATGATAAAGTTTCTGGCAAGATCGTGCATGGAGGTGAAAAGGACAAAACAAAGCTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCACTAATTATGACGGAGGAGATATTTGGTCCCCTGCTTCCCATTCTCACGGTCGACAAGGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACTAACAACAAGAAGCTCAAGGAACGATTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGAAACCGCCTTACATTTGACGGTTAGCACGTTGCCGTTCGGAGGAGTTGGAGAGAGTGGAATGGGAGCTTACCATGGAAAGTTCTCCTTTGATGCATTTAGCCATAAGAAGGCCGTTCTTTATCGAAGTTTCGCAGGTGATGCGCCGATGAGATATCCGCCATACACAAAGGGAAAGCTCAAAATTCTCAAGGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCTTTACTTGGTTGGTCATAA 1455 44.12 MAEIAVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLVCENEEEMVQTVHSDLYKPEFEAFAHEIALLKGSCKLALKELRRWMAPEKVKTSITTFPSSGAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLAKYLDTSAVKVVEGAVPETNALLERKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIAGKWGCNNGQACIAPDYIITPKEFAPKLVESLKQELERFYGKNPLETKDLSRIVNAKHFDRLTRLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLKILKALLGGGILGLIRALLGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30625671 30632639 + CePI673135_11g016320.1 Cec11g1632 216844

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1632 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620(InterPro)
Cec11g1632 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491(InterPro)
Cec11g1632 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491(InterPro)
Cec11g1632 484 PIRSF ALDH 2 474 IPR012394 GO:0006081(InterPro)
Cec11g1632 484 CDD ALDH_F3FHI 12 443 - -
Cec11g1632 484 FunFam Aldehyde dehydrogenase 221 421 - -
Cec11g1632 484 PANTHER ALDEHYDE DEHYDROGENASE 11 482 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Cec11g1632 484 FunFam Aldehyde dehydrogenase 20 224 - -
Cec11g1632 484 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491(InterPro)
Cec11g1632 484 Pfam Aldehyde dehydrogenase family 2 441 IPR015590 GO:0016491(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1632 K00128 - - csv:101219329 868.611
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0979 Cec-Chr7:24106136 Cec11g1632 Cec-Chr11:30625671 1.10E-133 dispersed
Cec11g1632 Cec-Chr11:30625671 Cec11g1633 Cec-Chr11:30639926 6.00E-233 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec06g1171 . 1 502 Aldehyde Dehydrogenase Gene Family AT3G24503 69.8 6.1e-212 733.8
Cec02g1743 . 51 535 Aldehyde Dehydrogenase Gene Family AT3G24503 54.7 3.9e-158 555.1
Cec06g1889 . 71 555 Aldehyde Dehydrogenase Gene Family AT3G24503 54.3 3.4e-154 542.0
Cec06g1889 . 1 555 Aldehyde Dehydrogenase Gene Family AT3G48000 76.0 3.5e-250 860.9
Cec02g1743 . 1 535 Aldehyde Dehydrogenase Gene Family AT3G48000 75.3 6.2e-247 850.1
Cec06g1171 . 18 502 Aldehyde Dehydrogenase Gene Family AT3G48000 54.6 1.5e-160 563.1
Cec02g1743 . 1 385 Aldehyde Dehydrogenase Gene Family AT1G23800 76.9 3.6e-170 594.7
Cec06g1889 . 50 399 Aldehyde Dehydrogenase Gene Family AT1G23800 78.0 2.7e-165 578.6
Cec06g1171 . 18 346 Aldehyde Dehydrogenase Gene Family AT1G23800 54.7 3.8e-103 372.1
Cec11g1632 . 7 484 Aldehyde Dehydrogenase Gene Family AT4G34240 63.8 9.1e-182 633.6
Cec11g1633 . 7 484 Aldehyde Dehydrogenase Gene Family AT4G34240 63.2 4.0e-177 618.2
Cec11g1632 . 72 482 Aldehyde Dehydrogenase Gene Family AT1G44170 71.3 2.6e-176 615.1
Cec11g1633 . 72 482 Aldehyde Dehydrogenase Gene Family AT1G44170 71.5 3.8e-175 611.3
Cec02g2438 . 67 478 Aldehyde Dehydrogenase Gene Family AT1G44170 50.2 6.2e-117 417.9
Cec07g0979 . 1 477 Aldehyde Dehydrogenase Gene Family AT4G36250 63.1 5.2e-184 641.0
Cec02g2438 . 2 480 Aldehyde Dehydrogenase Gene Family AT4G36250 55.5 1.9e-157 552.7
Cec02g1968 . 37 609 Aldehyde Dehydrogenase Gene Family AT1G79440 65.7 6.8e-214 740.3
Cec09g1759 . 12 502 Aldehyde Dehydrogenase Gene Family AT2G14170 82.7 1.3e-240 829.3
Cec04g1524 . 249 683 Aldehyde Dehydrogenase Gene Family AT2G14170 68.0 1.5e-180 629.8
Cec06g1867 . 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 81.4 2.5e-250 861.3
Cec06g1867 . 1 503 Aldehyde Dehydrogenase Gene Family AT3G48170 81.3 3.5e-252 867.5
Cec02g1787 . 1 502 Aldehyde Dehydrogenase Gene Family AT2G24270 89.8 9.2e-269 922.5
Cec01g1535 . 21 555 Aldehyde Dehydrogenase Gene Family AT5G62530 78.0 1.7e-260 895.2
Cec06g0463 . 1 587 Aldehyde Dehydrogenase Gene Family AT3G66658 76.1 3.5e-275 944.1