Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1652 ATGCACAGCCAAACACCATCGACCAAACATGACAGTCAACTGAACGCCACCGTCTTCTTCCTCAACTCCCCTTCTGTTTTCTTTTTCTGTTTCATCGATCGATTCTATTCCTCTTTGAAGGAACTTGATTGGAATTTGAGCCGTCGACGCCGGACAGCTAGTGGGATGGCGGCAGCGGTCGGAGGAGGTAGTGGTAACGTCGGCGGTGGAGATGTGTCGAAGGCGCATGCGGCTATGGCTTTGGTGCAAGTAATCAATGGAGGTTATCATGTTATAACCAAAGTCGCCCTCAATGTTGGAATGAACCAGCTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCGCGATTCTTTCCCCTGTCGCCTATGTTCGGGAGAAGCGGATTCGTTTGCCCATGACTCGAGACCTCCTCATATCATTCTTCGTTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTCGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCAATACAGCCTGCCATTCCAGTTTTTACATTCCTTTTTGCTGTTATGATGGGCACAGAGACTGTGAACTTACTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACCCTCGTTTGTGTCTCTGGTGCCATATTGATGGTTTTATTCCGTGGTCCAGCTTTGGTTGGAAGCACTGAATCTGATTTCATGTCACATAGCGAAATAAGTGCAAGGGGCCAGCCAGAGCCTGCTGGATGGTTAATGTCTAACTTTCTGGAGTATGGATTGGATCATTTTCATGTTGGGGTTTTATGCTTGATAGGAAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGAGTGTTAAAGAAGTATCCTGCTAACTTATCAGTCACAGCATATTCTTATTTATTTGGTGCTATATTGATGGTGATCACATCCTTCTTTATGACCAACGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTTGCTGTCCTTTATGCCGGAGTTTTTGCATCTGCCATCAACTATGGACTCTTGACATGGTGCAATAAAATATTAGGACCTGCATTGGTCGCTCTTTACAATCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGATCTCTTATAATTGCTGGTCTTTATTTGGTTACATGGGCGTCACATAGGGAACGACAAACGACTCCGGTTTTGCTACCGCATTCAACCAGGTCCTCCGAACCACTTATTCATAAAGATGCATTGACTAACAAGTTTGCATATCAGATAGGACACATTTTCTCAGGGTCTGCCTCATCACCCAAATCTGTCTTTAATGTTCTTCAACTGGATGGTTTCTGGGTTTCCGGCCTGAGGGCTTTTAGCTTAATCTTTTCCTGCGGATCCGGCGTGATTTCTTAA 1446 45.23 MHSQTPSTKHDSQLNATVFFLNSPSVFFFCFIDRFYSSLKELDWNLSRRRRTASGMAAAVGGGSGNVGGGDVSKAHAAMALVQVINGGYHVITKVALNVGMNQLVFCLFRDLLALAILSPVAYVREKRIRLPMTRDLLISFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTETVNLLKLEGQAKVGGTLVCVSGAILMVLFRGPALVGSTESDFMSHSEISARGQPEPAGWLMSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAILMVITSFFMTNESTDWNLTQSEFFAVLYAGVFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTPVLLPHSTRSSEPLIHKDALTNKFAYQIGHIFSGSASSPKSVFNVLQLDGFWVSGLRAFSLIFSCGSGVIS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30832818 30840521 - CePI673135_11g016520.1 Cec11g1652 216864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1652 481 PANTHER WAT1-RELATED PROTEIN 77 414 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec11g1652 481 Pfam EamA-like transporter family 264 400 IPR000620 GO:0016020(InterPro)
Cec11g1652 481 Pfam EamA-like transporter family 77 198 IPR000620 GO:0016020(InterPro)
Cec11g1652 481 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 406 - -
Cec11g1652 481 SUPERFAMILY Multidrug resistance efflux transporter EmrE 110 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g1619 Cec-Chr11:30471817 Cec11g1652 Cec-Chr11:30832818 1.30E-36 dispersed
Cec11g1652 Cec-Chr11:30832818 Cec08g1510 Cec-Chr8:26841942 9.40E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1652 - - - 0.0