Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1677 ATGGCGACAACTGACAGGTTTAGAGGTTGGGGGAAATTTCGTGTCCGATTCAACGAAGGGGGCGGGGACAGGGATCTTACATCTATCACAACCTCACGGCGATTTTCCATCTGCATTTCACGCTTGCTAGATCCTAGATCGGTTTTCAGGTGTCATTTTTCTTGCAGCAGCTCGTTGTTACCAGATTACTATATGTTCAAGAAAGCCATTCCTGTATTTGGTATCTCAGATGGTTTTTTAAGCAGGGGTATCAGTTCTGATGGCGAGGCACTCTTGAGCTTCAGAGCATCAATTATTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGAACCCCATCCTTGTAAATGGAAAGGAATAACATGTGATCCAAAAACCAAGAGAGTGATATATTTGAGTCTTCCTTATCACAAACTTAGTGGATCGCTATCCCCCGAACTTGGAAAGCTTGACCACCTAAAAATTTTAGCTCTTCATGACAATAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCACAGTTGCATGGAGTGTTCCTGCAGGGTAATTACTTTAGTGGGTTCATTCCCAATGAATTAGGGAATCTTTCGGCACTTAAAAACTTAGACATTTCAAGTAACTCACTCGGTGGAAATATTCCCATCTCGCTCGGGAAGCTGAGCAAGCTTATTAGTTTAAACGTGTCTGCCAATTTTCTGGTTGGATCAATTCCAAATGTTGGCGTGCTACTCAACTTCTCGGAAAGCTCATTTCTTGGAAACCGTGGCTTGTGCGGGAAGCAAATAAATGTTATGTGCAAAGATGACAAAAAGGGACCTGAAACTAATGAGTCACCATTCTCAGTGGAAAATCAAAGTGGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCGGCAACTGTGGGTGCTTTACTGCTGGTTGCCCTAATGTGTTTCTGGGGTTGCTTTCTGTATAAAATGTTCGGCAAAAATGACAGTAAAGGTCTAGTGCTGGATGGTTGTGGAGGTGCTCGTCCTGCGGGTGTAATGTTTCATGGAGACTTGCCATACGTATCTAAAGATATTATTAAGAAATTTGAGACACTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACCGTGTACAAGCTTGCAATGGATGATGGCAATGTTTTTGCCTTGAAAAGAATTGTAAAATTGAATGAGGGCTTTGATCGTTTTTTTGAGAGAGAGCTCGAAATTCTTGGAAGCATTAAGCACAGGTTTCTTGTGAATTTGCGAGGATATTGCAATTCTCCTACATCAAAGCTGTTAATTTATGATTTCCTTCCTGGAGGCAGCCTTGACGAGGCACTACACGGCCTCCGTACTGAATTGTCTGAGCAACTAGACTGGGATGCACGCTTAAATATTATCATGGGAGCTGCAAAGGGACTTGCATATTTGCATCATGATTGCTCCCCGCGGATAATTCACCGAGACATAAAATCAAGCAACATTTTACTTGACGCTAATTTGGAGGCTCGAGTCTCTGACTTTGGACTTGCGAAACTTTTAGAGGATGAAGAATCACACATCACGACTATTGTTGCAGGAACATTTGGTTATCTGGCTCCTGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTATACAGTTTTGGGGTATTGGTACTTGAAGTGTTGAGTGGCAAACGTCCCACAGATGCTTCATTCATTGAGAAGGGGCTAAACATTGTTGGTTGGTTAAACTTTCTAGTCACAGAGAATCGACAACGAGAAATAGCTGACTTACAGTGCGAGGGCATGCAAGCAGAGAGCTTGGATGCATTGCTTTCGGTTGCCATCCAATGTGTTTCGTCGAATGCAGAGGATCGACCAACCATGCACAGGGTAGTCCAGATATTGGAATCTGAGATTATGACTCCATGCCCAAGTGATTTCTATGATACAGATTAA 1962 42.56 MATTDRFRGWGKFRVRFNEGGGDRDLTSITTSRRFSICISRLLDPRSVFRCHFSCSSSLLPDYYMFKKAIPVFGISDGFLSRGISSDGEALLSFRASIIDSDGVLLQWKPEEPHPCKWKGITCDPKTKRVIYLSLPYHKLSGSLSPELGKLDHLKILALHDNNFYGTIPSELGNCSQLHGVFLQGNYFSGFIPNELGNLSALKNLDISSNSLGGNIPISLGKLSKLISLNVSANFLVGSIPNVGVLLNFSESSFLGNRGLCGKQINVMCKDDKKGPETNESPFSVENQSGKKYSGRLLISASATVGALLLVALMCFWGCFLYKMFGKNDSKGLVLDGCGGARPAGVMFHGDLPYVSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRFLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHGLRTELSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIADLQCEGMQAESLDALLSVAIQCVSSNAEDRPTMHRVVQILESEIMTPCPSDFYDTD 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31039582 31048547 - CePI673135_11g016770.1 Cec11g1677 216889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1677 653 Pfam Leucine rich repeat N-terminal domain 85 124 IPR013210 -
Cec11g1677 653 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515(InterPro)
Cec11g1677 653 Pfam Leucine Rich Repeat 202 223 IPR001611 GO:0005515(InterPro)
Cec11g1677 653 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 246 - -
Cec11g1677 653 SMART serkin_6 366 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1677 653 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Cec11g1677 653 ProSitePatterns Protein kinases ATP-binding region signature. 372 398 IPR017441 GO:0005524(InterPro)
Cec11g1677 653 Gene3D Phosphorylase Kinase; domain 1 346 441 - -
Cec11g1677 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1677 653 SUPERFAMILY Protein kinase-like (PK-like) 353 637 IPR011009 -
Cec11g1677 653 Gene3D Ribonuclease Inhibitor 84 271 IPR032675 -
Cec11g1677 653 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 340 441 - -
Cec11g1677 653 Pfam Protein kinase domain 368 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1677 653 ProSiteProfiles Protein kinase domain profile. 366 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1677 653 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 442 648 - -
Cec11g1677 653 SUPERFAMILY L domain-like 85 252 - -
Cec11g1677 653 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 245 639 IPR050647 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1228 Cec-Chr7:27777961 Cec11g1677 Cec-Chr11:31039582 4.70E-219 dispersed
Cec09g1405 Cec-Chr9:20059145 Cec11g1677 Cec-Chr11:31039582 2.70E-67 dispersed
Cec11g1677 Cec-Chr11:31039582 Cec11g1765 Cec-Chr11:31850201 5.90E-82 dispersed
Cec11g1677 Cec-Chr11:31039582 Cec01g1526 Cec-Chr1:29863629 2.40E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72426 PF00069 Pkinase 1.10E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1677 - - - 0.0