Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1723 ATGGTGTGGGGTATGGGGGAGAATGGACCGTGTACAGATTTCAACACCACCACTCTTCCACAGCAGTTCTGGTATGTTAGAAGCTTTCCTGAAGGAGAGAGAAACTGTTACACCATAAAGCTTGCTCAGGGTAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGATGGCCAAGGTACAGCACCGGCTTTCGATCTGTACATGGGTGTTAATAAATGGGATTCATCTAAGGGAACTGCTTCTGCCAGGGATTTGTCAAACAATAGCTTGAGTGGACCGGTGCCCGGTTTTCTATCCAAATTGCAGTCCTTGAAAGTTTTAGACTTGAGGGACAATCCTCTCCTTGGTTCTATACCAAGTGAACTCATGGATAGATCGAAGAACGGATCCCTTTCAATAAGGGTTGGAGGAAACATGGATTTTTGTGCTTCATCTTCTTGTCAAAAGAAGAAAAAGAGTTACGTTATTACAATTGTAGCAATAGTTTCATCATTGTTTGTCCTCTTAGCTGCAGCAGCAGTATGGATAATATTATGGAGAAAACGAGCCCGAAAACAGCCTGTCATAAGACTCGGGTCACTAGAGGAGAAAAAACAGCAGCTATCTTACTCTCAAATAAAGCGTATTACAAACAACTTTGAGAGAAAAATTGGAGAAGGAGGTTTTGCAAAAGTATTCCTCGGTTACTTGGATAATACTCAAGTCGCCGTGAAGGTCCTTAAGTCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGTTGAGAATTCATCATCGAAACTTGACGAGCCTTATCGGATACTGCTGTGAAAAAACCAACCTGGTTCTAATTTATGAGTACATAAATAATGGCAACTTAAAAGAGCATCTATCAGGTGACAAAGTTGGTGTCCTCAGTTGGGAGGAAAGGATGCAAGTAGCAGTCAATGCAGCGCAAGGGTTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGACAGATTCCAAGCTAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGCCAAACTCATTTGACAACTGTTGTTGCAGGGACCGATGGTTATCTTGACCCCGAGTATTACGCAACTGGCTGGTTGACTGAGAAAAGCGATGTATATAGTTTTGGAGTTCTTATATTGGAAGTAGTCACTTCCCGTCCAGTCCTCATGATTGATAGAGCTTCTTCACAGAAATATCATATAAGCCAATGGGTAATGCACTTGATGAAAACAGGTGATATAAGGAGCATTGTTGATCAGAGGGTGAGGGAAAACTTCGACTTGAGTTCTGCGTGGAAGGCAGTGGAGATTGCTATGAAATGTTTGTCATTGAATTCCATTGATAGGCCAAACATGAAAGAGGTAGTTACGGTGTTGAGTGAGTGTTTGGCGTTAGAGAAAGCTCGAAAACGAAGAAACGTCGATTCTAATATGGGAAAATCAAATGCAGTTAGTAGGAATTTCAGAGAGAGCGAAGTAACACCTTTTGCTAGATAG 1575 41.33 MVWGMGENGPCTDFNTTTLPQQFWYVRSFPEGERNCYTIKLAQGKGYKYLIRASFMYGNYDGQGTAPAFDLYMGVNKWDSSKGTASARDLSNNSLSGPVPGFLSKLQSLKVLDLRDNPLLGSIPSELMDRSKNGSLSIRVGGNMDFCASSSCQKKKKSYVITIVAIVSSLFVLLAAAAVWIILWRKRARKQPVIRLGSLEEKKQQLSYSQIKRITNNFERKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHRNLTSLIGYCCEKTNLVLIYEYINNGNLKEHLSGDKVGVLSWEERMQVAVNAAQGLEYLHHGCKPPIVHRDVKSANILLNDRFQAKIADFGLSKSFPTESQTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEVVTSRPVLMIDRASSQKYHISQWVMHLMKTGDIRSIVDQRVRENFDLSSAWKAVEIAMKCLSLNSIDRPNMKEVVTVLSECLALEKARKRRNVDSNMGKSNAVSRNFRESEVTPFAR 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31497152 31505357 + CePI673135_11g017230.1 Cec11g1723 216935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1723 524 ProSiteProfiles Protein kinase domain profile. 216 489 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1723 524 SMART serkin_6 216 489 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1723 524 Gene3D Ribonuclease Inhibitor 84 139 IPR032675 -
Cec11g1723 524 Pfam Protein kinase domain 218 482 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1723 524 PANTHER OS07G0107800 PROTEIN-RELATED 18 82 - -
Cec11g1723 524 ProSitePatterns Protein kinases ATP-binding region signature. 222 243 IPR017441 GO:0005524(InterPro)
Cec11g1723 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1723 524 Gene3D Phosphorylase Kinase; domain 1 197 289 - -
Cec11g1723 524 Gene3D Transferase(Phosphotransferase) domain 1 290 513 - -
Cec11g1723 524 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 290 498 - -
Cec11g1723 524 SUPERFAMILY L domain-like 89 127 - -
Cec11g1723 524 CDD STKc_IRAK 222 487 - -
Cec11g1723 524 Pfam Leucine Rich Repeat 108 127 IPR001611 GO:0005515(InterPro)
Cec11g1723 524 SUPERFAMILY Protein kinase-like (PK-like) 201 485 IPR011009 -
Cec11g1723 524 Pfam Malectin-like domain 12 83 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1464 Cec-Chr7:30239146 Cec11g1723 Cec-Chr11:31497152 5.60E-07 dispersed
Cec09g0030 Cec-Chr9:300061 Cec11g1723 Cec-Chr11:31497152 5.40E-81 dispersed
Cec09g0031 Cec-Chr9:317210 Cec11g1723 Cec-Chr11:31497152 6.60E-07 dispersed
Cec11g1723 Cec-Chr11:31497152 Cec11g1886 Cec-Chr11:33090248 2.00E-64 dispersed
Cec01g0117 Cec-Chr1:1003369 Cec11g1723 Cec-Chr11:31497152 1.40E-45 transposed
Cec11g0464 Cec-Chr11:4945963 Cec11g1723 Cec-Chr11:31497152 3.30E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72427 PF00069 Pkinase 1.60E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1723 - - - 0.0