Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1779 ATGTTCATGGCTCGATTCCTCGCCGTCTTTCTTTTCTTTTCTCTCATTTCCGCCGTCCCTCAGCTGCCGGCCGACGAAGTTGAAGCGTTAAAGGAGATCGGAAAGGCATTGGGGAAGGCGGACTGGAATTTCACGTCGAATCCATGCGGCGGTTTGGGTAGCGGTTGGATAACCAATTCTTTCGAAACGGGGTTTGTTAATAATCTCACATGCAACTGCACCTTCCAGAATAACTCCGTTTGTCACGTCACTAAAATCCGTCTAAGGTCACAGAACCTTCCAGGCATTCTGCCGCCACAACTAGTGAGGCTGCCTTACTTGGAAGAACTTGATCTTGCCCGCAACTATCTCAGCGGTCCAATTCCTCCAGAATGGGGTGCTTCAAAGCTTGTCAACATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTATAGAGTTGATCCTTGAAGTTAATCAGTTGTCTGGAAGTCTGCCTCCAGAACTTGGAAAGCTGACCAGGTTATCAAGATTACTTCTTTCCTCAAACAACTTTTCCGGGGAGCTCCCATCTTCACTGGGAGCTATAACCACATTGACGGACTTTCGAATTAGTGATAATCACTTCACAGGGTCAATACCCAAGTACATTCAGAATTGGCCGAATCTTGGAAAACTAGGTATTCAGGCAAGCGGGCTGAGTGGACCAATTCCTTCTGAAATTGGACTTCTGACAAAATTATTGGATCTGAGAATCAGCAACTTGAATGGAGGTTCATCGTCCTTTCCACCCCTTAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGCTGCAATATGGTTGGGATGCTGCCTGACAATCTTGATGGGTTGGAAAACGTGCAAACCTTAGACTTTAGCTTCAACAAAATTAGTGGACCAATACCTGCCGGCTTTGAAGCTTTGAAGAAAGTGGATAGAATATATTTAACTGGAAACTTGCTAACTGGAGCTGTGCCTCTTTGGATGCTGCAGGAGGGAGAAAACATTGATCTCTCTTATAACACATTTACTGAGACAGATTTTCAGGCCTTGGGTTGTGAAGCACGAAGTTTAAACCTGTTCGCGAGCTCTTCACAGGACAATACTTCTGGAACAGTTTCATGTTTAGCGGGCACATGTGACAAAACTTGGTACTCTCTCCATATCAATTGCGGTGGGAAGGAAGATTTAATAAACGGAACAATCAGGTTTGATGGAGACACAAACACGGGGAAATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGATGATGATCGCTCAACAGACGACTTCATTGCATTAAGTCCACCGGATCTCCCTATGAAAAATCTTGGATTGTACACCAATGCACGGATTTCTCCCATCTCTCTTACTTATTATGCGTATTGCATGGGTAATGGAAACTACACAGTAAGCCTACATTTTGCTGAGATAGAGTTTAGTAATGACAAATCATTCAAAAGCCTTGGCAGACGCATATTTGATGTCTTCATTCAGAGAGAGCTGGTGTTGAAGGATTTTAATATTGCAGAGGCAGCAGGTGGTGTTGGCAAACCTCTTGTAGAGAAATTCACTGTTTCTGTGACTAATGGTACTATAGAGATCCGCCTATTTTGGGCGGGGAAGGGGACAAATGCAGTCCCTGTAAGAGGAATTTATGGTCCTCTAATTTCAGCCATTTCTGTTGATCCTGACTTTGATCCACCATCAGAAGGTGGAAATGCCATATCCGCTGGAGTGGTTGGAATTGTGGCTGCTGTGGTCTTGGTTATCATCTTGCTTCTAGGGGTCTTGTGGTGGAGAGGCAGCCGAAGAACGAAAAGCACACTTGAACAAGAGTTGAAGGATCTTGATCTCGGAACAGGATCATTTTCATTAAGACAAATCAAAGCTTCCACTAACAATTTTGATGTTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCGTTCTTGCTGATGGCAGTGTAATTGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATATACGAGTATCTGGAAAATAACAGTCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAAATTGGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAAAGGTTTAGCATACCTTCACGACGAGTCAAGACTAAAGATCGTTCACCGTGACATCAAAGCTACCAATGTTCTTCTCGACAAAAATCTAAACCCGAAGATTTCCGATTTTGGTTTGGCTAGGCTAGATGACGAAGGAAATACACACATCAGCACACGGGTTGCTGGAACCTATGGATATATGGCACCAGAATATGCCATGCGAGGGTACTTAACTGACAAAGCAGACGTTTATAGTTTTGGTGTGGTAGCATTGGAAATAGTTGGTGGTCGAAGCAACACAAGTTTTGGAACCAAGGATGATTGCTTATATCTTCTTGATTATGCTAACGTTTTAAAAGAGAGAGGGAATTTACTAGACCTTGTCGATCCACGGTTAGGCTCTGAATTCAACAAGACAGAGGCGATGACGATGATCACTATCGCCCTTCAATGCACGAACATCAGTGCTGCAGACAGACCCTCCATGTCAGCAGTAGTAGGCATGCTGGAAGGGAAGATTGGTGTAGAGGAGTTGGTTTCAGATCCAAATATCTCAAAGCAAGATGTGAATGCTATGTGGAGCCTCATGTACCACCAGAAAGTGAAAACAATGGGCGAGAGCGAGATACAAAGTATGTTGACATGTGAGAGCGAGAGCGAGACCCAAAGTATGTTGATGGATGGACCATGGACTGATTCTTCAATTACTGATAGTGATCGCCTTCCCATCATGGCTGATGCTAGATACTTGGAGAATAGGATTTAG 3042 43.39 MFMARFLAVFLFFSLISAVPQLPADEVEALKEIGKALGKADWNFTSNPCGGLGSGWITNSFETGFVNNLTCNCTFQNNSVCHVTKIRLRSQNLPGILPPQLVRLPYLEELDLARNYLSGPIPPEWGASKLVNISLLGNRLTGPIPKEIGNISTLIELILEVNQLSGSLPPELGKLTRLSRLLLSSNNFSGELPSSLGAITTLTDFRISDNHFTGSIPKYIQNWPNLGKLGIQASGLSGPIPSEIGLLTKLLDLRISNLNGGSSSFPPLNSLTKLKTLILRSCNMVGMLPDNLDGLENVQTLDFSFNKISGPIPAGFEALKKVDRIYLTGNLLTGAVPLWMLQEGENIDLSYNTFTETDFQALGCEARSLNLFASSSQDNTSGTVSCLAGTCDKTWYSLHINCGGKEDLINGTIRFDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRSTDDFIALSPPDLPMKNLGLYTNARISPISLTYYAYCMGNGNYTVSLHFAEIEFSNDKSFKSLGRRIFDVFIQRELVLKDFNIAEAAGGVGKPLVEKFTVSVTNGTIEIRLFWAGKGTNAVPVRGIYGPLISAISVDPDFDPPSEGGNAISAGVVGIVAAVVLVIILLLGVLWWRGSRRTKSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLADGSVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLKLDWPTRQKICVGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDDEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKDDCLYLLDYANVLKERGNLLDLVDPRLGSEFNKTEAMTMITIALQCTNISAADRPSMSAVVGMLEGKIGVEELVSDPNISKQDVNAMWSLMYHQKVKTMGESEIQSMLTCESESETQSMLMDGPWTDSSITDSDRLPIMADARYLENRI 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31966794 31981932 - CePI673135_11g017790.1 Cec11g1779 216991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1779 1013 Gene3D - 397 585 - -
Cec11g1779 1013 SUPERFAMILY Protein kinase-like (PK-like) 641 940 IPR011009 -
Cec11g1779 1013 Gene3D Ribonuclease Inhibitor 35 195 IPR032675 -
Cec11g1779 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 733 940 - -
Cec11g1779 1013 SMART serkin_6 657 928 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1779 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 395 586 - -
Cec11g1779 1013 ProSiteProfiles Protein kinase domain profile. 657 938 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1779 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 626 732 - -
Cec11g1779 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1779 1013 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515(InterPro)
Cec11g1779 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 943 IPR051824 -
Cec11g1779 1013 Gene3D Phosphorylase Kinase; domain 1 621 732 - -
Cec11g1779 1013 Pfam Protein tyrosine and serine/threonine kinase 659 926 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1779 1013 Pfam Leucine Rich Repeat 178 197 IPR001611 GO:0005515(InterPro)
Cec11g1779 1013 Pfam Leucine Rich Repeat 107 126 IPR001611 GO:0005515(InterPro)
Cec11g1779 1013 Gene3D Transferase(Phosphotransferase) domain 1 733 940 - -
Cec11g1779 1013 SUPERFAMILY L domain-like 74 355 - -
Cec11g1779 1013 Pfam Malectin domain 397 581 IPR021720 -
Cec11g1779 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 23 259 - -
Cec11g1779 1013 CDD STKc_IRAK 663 930 - -
Cec11g1779 1013 Gene3D Ribonuclease Inhibitor 201 396 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g1779 Cec-Chr11:31966794 Cec11g1781 Cec-Chr11:32008008 2.30E-210 dispersed
Cec11g1779 Cec-Chr11:31966794 Cec11g1780 Cec-Chr11:31983638 0.00E+00 tandem
Cec03g0678 Cec-Chr3:7291644 Cec11g1779 Cec-Chr11:31966794 1.30E-205 transposed
Cec09g2322 Cec-Chr9:40108638 Cec11g1779 Cec-Chr11:31966794 5.60E-204 transposed
Cec10g1973 Cec-Chr10:34510559 Cec11g1779 Cec-Chr11:31966794 1.70E-57 wgd
Cec11g0552 Cec-Chr11:6039190 Cec11g1779 Cec-Chr11:31966794 1.10E-66 wgd
Cec11g1779 Cec-Chr11:31966794 Cec07g1128 Cec-Chr7:26516638 2.90E-80 wgd
Cec11g1779 Cec-Chr11:31966794 Cec07g0324 Cec-Chr7:3179289 1.00E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72429 PF07714 PK_Tyr_Ser-Thr 3.00E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1779 - - - 0.0