Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1780 ATGCTGTTGGCTCGATTACTCGTCGTCGTTTTTTTCTCATCTCTCTGCTTCGTAACCCTCACTTCCGGAGCCGCTCTGTTGCCGGCCGACGAAGTGGAAGCGTTGAAGGAGATCGGAAGGACATTGGGGAAGACGGGGTGGGATTTCACCGCCGATCCATGCGGCGGCGTTAGTAGCGGTTGGGTATCGAATTCCAAACAATTCGATAATAATTTTGCTAATAATGTCACGTGCGACTGCACGTTCCAAAATAATACCGTCTGTCACGTCACCATCATTGTTCTGAAGGCGCAGAGCCTTCAAGGTACTTTGCCTCCGCAACTAGTGAGGTTGCCTTTCCTGCAGGAACTTGATCTCACTCGCAACTATCTCAGCGGCCCGATTCCTCCAGAATGGGGTTCAACCAAGCTTCTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCACCACTCTTACAGACTTGGTTTTGGAAATGAATCATTTTTCTGGAAGTATACCTCCGGAACTTGGAAATTTGACCAACTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCCTTGGCAAGGATAACCTCATTGACAGACTTTCGAATTGGTGATAATCACTTTACAGGGCCAATACCTAAGTTTATTCAGAATTGGACGAATCTTGCAAAAGTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAAAATTAACTGATGTGAGAATCAGCGACTTGAATGGAGGTTCATTGCCCTTTCCACCCCTTAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGTTGCAATATAACTGGGATGCTACCCGACAATCTTGGTGGTTTGACATCATTGAAAATCTTAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGATAGTTTTGAAGCATTAAAAAAAGTGGATAGCATATATCTAACTGGAAACTTGCTAAACGGATCAGTGCCCATTTGGATGCTAGATCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAGAAACTCTCAGAACACTGGTTGTCAATCACGAAATTTAAACCTATTTGCAAGCTCTTCACAGGACAATAATTCTGGAGCAGTCTCATGTTTAGGCGCTTGTCAAAAAACTTGGTACTCTGTCCATATAAACTGCGGAGGGAATGAAGAATTAATTAATGGAACAACCAAATTTGATGCTGACGCAAACACTGGAAGATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGTAATACTGGCAATTTTATGGACGATGATCGCTCAACAGACGATTTTATTGCATTAAACTCATCTACTCTCTCAATACCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCTTGGGTACTGGAAACTACACACTAAGCCTTCATTTTGCTGAGATAATGTTTACTAATGACAAAACATACAGTAGCCTTGGCAGACGCTTATTTGATGTTTACGTTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTATTGGCAAACCTTTTGTAAAGAAATTCAAAGTTTCAGTGACTAATGGTACTATAGATATCCGCCTATTTTGGGCTGGAAAGGGGTCAAATGCAATCCCTGTGAGAGGAGTTTATGGTCCTTTAATTTCCGCCATTTCTGTTGATCCTGACTTTACGCCACCATCAGAAGGTGGAAATGCCATATCTGCCGGTGCAGTGGTTGGAATTGTGCTTGCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAGTGTTGTGGTGGAGAGGCTGCCTAAGAAAGACAAGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTATTCTTGCAGATGGCACCGCAATTGCTGTGAAACAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATTTGGAAAACAATAGCCTTGCTCGGGCCTTATTTGGACCTGAAGAATGCCAACTGAAATTGGATTGGCCAACTAGGCAAAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATACCTTCACGAGGAGTCAAGACTTAAGATCGTTCACCGAGATATCAAAGCTACCAATGTTCTACTCGATAAAAATCTCAACCCCAAGATTTCCGACTTCGGTTTGGCAAAGCTGGATGAAGAAGAAAATACACATATCAGCACCCGGGTTGCTGGAACCTATGGGTATATGGCACCAGAATATGCCATGCGAGGCTACTTAACTGACAAGGCAGATGTGTACAGCTTTGGTATTGTGGGGTTGGAGATAATCAGTGGTCGAAGCAACACAAGTTTCCGGACCAAGGACGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGGCCGTTTATTAGAGCTTGTCGATCCACGGTTAGGCTCTGATTTCAACAAGAGAGAGGCAATGACGATGATCAACATTGCTCTCCAATGTACAAACGTCGTTGCTGGTGACAGGCCTGCCATGTCATCAGTGGTGAGCATGCTGGAGGGGAAGGTTGTTGTGAAGGAGGTGGTTTCAGATCCCAGTGTCTCAAAACAAGATGTGAATGCAACGTGGAGCCAGATTTATCGCCAGAAAGGGGAAACAACGAGTGTAAGCCAGACGCAAAGTTTGACTATGGATGGACCATGGAGTGGTTCTTCAACAACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAGAATAGGAACTAG 3027 42.48 MLLARLLVVVFFSSLCFVTLTSGAALLPADEVEALKEIGRTLGKTGWDFTADPCGGVSSGWVSNSKQFDNNFANNVTCDCTFQNNTVCHVTIIVLKAQSLQGTLPPQLVRLPFLQELDLTRNYLSGPIPPEWGSTKLLKISLLGNRLTGPIPKEIGNITTLTDLVLEMNHFSGSIPPELGNLTNLSRLLLTSNNFSGELPPSLARITSLTDFRIGDNHFTGPIPKFIQNWTNLAKVAIQASGLSGPIPSEIGLLTKLTDVRISDLNGGSLPFPPLNSLTKLKTLILRSCNITGMLPDNLGGLTSLKILDFSFNKITGPIPDSFEALKKVDSIYLTGNLLNGSVPIWMLDQGESIDLSYNKFTQRNSQNTGCQSRNLNLFASSSQDNNSGAVSCLGACQKTWYSVHINCGGNEELINGTTKFDADANTGRSSLFFQGGANWGFSNTGNFMDDDRSTDDFIALNSSTLSIPNPELYMRARISPISLTYYAYCLGTGNYTLSLHFAEIMFTNDKTYSSLGRRLFDVYVQGKLELKDFNIADAAGGIGKPFVKKFKVSVTNGTIDIRLFWAGKGSNAIPVRGVYGPLISAISVDPDFTPPSEGGNAISAGAVVGIVLAVVFVIILVLGVLWWRGCLRKTSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGILADGTAIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEECQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGIVGLEIISGRSNTSFRTKDDCFYLLDHANTLKEKGRLLELVDPRLGSDFNKREAMTMINIALQCTNVVAGDRPAMSSVVSMLEGKVVVKEVVSDPSVSKQDVNATWSQIYRQKGETTSVSQTQSLTMDGPWSGSSTTASDLYPINMDSKYLENRN 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31983638 31995221 - CePI673135_11g017800.1 Cec11g1780 216992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1780 1008 Pfam Malectin domain 403 587 IPR021720 -
Cec11g1780 1008 SUPERFAMILY L domain-like 73 347 - -
Cec11g1780 1008 CDD STKc_IRAK 670 935 - -
Cec11g1780 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Cec11g1780 1008 Gene3D Phosphorylase Kinase; domain 1 631 739 - -
Cec11g1780 1008 Pfam Protein tyrosine and serine/threonine kinase 667 934 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1780 1008 Gene3D Ribonuclease Inhibitor 268 379 IPR032675 -
Cec11g1780 1008 Gene3D Ribonuclease Inhibitor 194 267 IPR032675 -
Cec11g1780 1008 SMART serkin_6 664 935 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1780 1008 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Cec11g1780 1008 Pfam Leucine Rich Repeat 184 204 IPR001611 GO:0005515(InterPro)
Cec11g1780 1008 Pfam Leucine Rich Repeat 114 133 IPR001611 GO:0005515(InterPro)
Cec11g1780 1008 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Cec11g1780 1008 SUPERFAMILY Protein kinase-like (PK-like) 648 960 IPR011009 -
Cec11g1780 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1780 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 739 - -
Cec11g1780 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 28 266 - -
Cec11g1780 1008 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515(InterPro)
Cec11g1780 1008 MobiDBLite consensus disorder prediction 970 991 - -
Cec11g1780 1008 Gene3D Transferase(Phosphotransferase) domain 1 740 954 - -
Cec11g1780 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 592 - -
Cec11g1780 1008 ProSiteProfiles Protein kinase domain profile. 664 915 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1780 1008 Gene3D - 400 591 - -
Cec11g1780 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 951 IPR051824 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0678 Cec-Chr3:7291644 Cec11g1780 Cec-Chr11:31983638 1.20E-206 dispersed
Cec07g1102 Cec-Chr7:26197631 Cec11g1780 Cec-Chr11:31983638 7.00E-231 dispersed
Cec09g2322 Cec-Chr9:40108638 Cec11g1780 Cec-Chr11:31983638 5.80E-209 dispersed
Cec11g0058 Cec-Chr11:733511 Cec11g1780 Cec-Chr11:31983638 4.50E-130 dispersed
Cec11g1780 Cec-Chr11:31983638 Cec11g0254 Cec-Chr11:2691823 1.00E-69 dispersed
Cec11g1779 Cec-Chr11:31966794 Cec11g1780 Cec-Chr11:31983638 0.00E+00 tandem
Cec11g1780 Cec-Chr11:31983638 Cec11g1781 Cec-Chr11:32008008 3.50E-219 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72430 PF07714 PK_Tyr_Ser-Thr 8.40E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1780 - - - 0.0