Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1838 ATGACTGGGAAAGATATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGATGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACCTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA 852 42.49 MTGKDILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32569232 32571708 + CePI673135_11g018380.1 Cec11g1838 217050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1838 283 Gene3D - 30 283 IPR036457 -
Cec11g1838 283 SUPERFAMILY PP2C-like 31 283 IPR036457 -
Cec11g1838 283 SMART PP2C_4 31 280 IPR001932 -
Cec11g1838 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Cec11g1838 283 CDD PP2Cc 43 282 IPR001932 -
Cec11g1838 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Cec11g1838 283 PANTHER PROTEIN PHOSPHATASE 31 280 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec11g1838 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2230 Cec-Chr4:40053214 Cec11g1838 Cec-Chr11:32569232 2.80E-47 dispersed
Cec10g0939 Cec-Chr10:20774523 Cec11g1838 Cec-Chr11:32569232 2.00E-85 dispersed
Cec11g0982 Cec-Chr11:16328819 Cec11g1838 Cec-Chr11:32569232 8.00E-18 dispersed
Cec11g1465 Cec-Chr11:28853053 Cec11g1838 Cec-Chr11:32569232 1.10E-86 dispersed
Cec04g2229 Cec-Chr4:40052640 Cec11g1838 Cec-Chr11:32569232 6.30E-16 transposed
Cec11g1838 Cec-Chr11:32569232 Cec07g0291 Cec-Chr7:2857153 3.20E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1838 K17506 - csv:101215129 534.643