Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1838 | ATGACTGGGAAAGATATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGATGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACCTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 42.49 | MTGKDILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32569232 | 32571708 | + | CePI673135_11g018380.1 | Cec11g1838 | 217050 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1838 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - | |
Cec11g1838 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
Cec11g1838 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Cec11g1838 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Cec11g1838 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Cec11g1838 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Cec11g1838 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cec11g1838 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g2230 | Cec-Chr4:40053214 | Cec11g1838 | Cec-Chr11:32569232 | 2.80E-47 | dispersed | |
Cec10g0939 | Cec-Chr10:20774523 | Cec11g1838 | Cec-Chr11:32569232 | 2.00E-85 | dispersed | |
Cec11g0982 | Cec-Chr11:16328819 | Cec11g1838 | Cec-Chr11:32569232 | 8.00E-18 | dispersed | |
Cec11g1465 | Cec-Chr11:28853053 | Cec11g1838 | Cec-Chr11:32569232 | 1.10E-86 | dispersed | |
Cec04g2229 | Cec-Chr4:40052640 | Cec11g1838 | Cec-Chr11:32569232 | 6.30E-16 | transposed | |
Cec11g1838 | Cec-Chr11:32569232 | Cec07g0291 | Cec-Chr7:2857153 | 3.20E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1838 | K17506 | - | csv:101215129 | 534.643 |