Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1842 ATGGGGTTCTCTAGATCTCTCTCACTTTCTCTCTGCATTTTCTTCCCCTCTTTTCTCTCCCTCTCTCAAGCTTATACGTTCTACGTCGGTGGAAAAGATGGGTGGGTTCTCAACCCTTCTGAGACCTACCAAAATTGGGCTCATCGAAACAGATTTCGAGTCAATGACGTTCTCGTGTTTAAGTATGCAAGAGGCTCGGATTCTGTGCTGCTTGTGAGTAAAGAGGATTATGAGAAATGTGATTTGAAGAATCCGATTGTCAAATTGGAAGATGGGAATTCGGAGTTTAAATTTGATCGTTCTGGGGCTTTCTATTTTGTTAGTGGGAAACAGGGGAGCTGTGAAAAGGGCCAGAAATTGGTTGTGGTGGTTATGGCTATGCGCTCTCTTCCTCCGCCACCTTCTGGAGCTAAGTCGCCACAGGTTTCTCCTTTCCCGCCGTCTATTTCGCCGTATCCCGGAGCAAAATCGCCTTCGGGAACACCCACTTTACCTTCTCCACCTGAGGCTAAACCTCCGGTGCCGTCAGGTTCTCATTCTCCTGGGGCAAAATCTCCTTCTGCTTCTCCGCCGTCGGGGACACCTAGTTCGCCATCGCCGTCGTCAGGGACACCTATTTTGCCAACTCCGCCTTCAGGAACACCGAGTTCACCGTCTCCTTCTGAGTCTCATGCTCCAGTGCCGTCAGGTTCTCATTCCCCTGGTTCACCCTATCCCGGAGCTAAATCTCCTTCTAGTTCTCCGCCGTTGCCCCCTTCAGGGACACCTATTTTGCCATCGCCGCCGTCGGGAACGCCCAGTTCACCATCTCCTTCTGAGTCTCATGCTCCGGTGCCGTCAAGCTCTCATTCACCTGGTTCGCCCTATCCCGGAGCCAAATCTCCCTCTAGTTCTCCGCCGTCGGGGACGCCTAGTTCGCCGTCGCCGTCGTCAGGAACCCCTATTTTGCCATCTCCGCCGTCGGGAACACCCAGTTCACCATCTCCTTCCGAGTCCCATGCTCCTGGTTCGCCATATCCCGGAGCTCAATCTCCATCTGGTTCTCCGCCATCGAGGACACCAACCTCACCATCTCCGTCGTCGGGAATACCCACTTCGCCATCTCCGTCTGGTTTTGAAACTCCGGTAAGTACACCAGTGCCGGCTGGTTCCCCGTCTTCGCCTTATCCGGGAGCTAAATCTCCGTCGTCGGGAACACCCACTTCGCCATCTCCGTCTGGGTCTGAAACTCCGGTGACCACGCCAGTGCCAGTCGGTTCCCCTACTTCCCCGTATCCAGGAGCTAAATCTCCGTCGTCAGGAACTCCCACTTCGCCATCTCCAGCTGGGTCTGAAACTCCAGTGACCACACCAACGCCGGCCGGTTCTCCCATATCACCTTACCCTGGAGCAAGCTCTCCGTCAAGGTCACACATTTCGCCGTCTCCTTCTGGTTCTGGAACTCCGACGACGACACCAGTCCCTGCCGGTTCTCCGACTTCCCCATTACCCAGTGCAATCTCTCCGTCGGGATCACCCTCTTCACCACTCCCCAGCGGCGCCGCCTCTCCCGGAACATCCCCCGCGGGCTCACCATCTTCAGGATCAAATTCTCCGACCACATCGCCATCTCCGGCCGGCGCTATCACTCCGACCACAGCTCCGGTGCCGGCATTTTCACCGAGTTCATCCTCTCCGATTACCTCTCCAGTGTTGTCGCCGTCGTCGGAAGTACCAGTCGTGTCTCCAGTACCGTCGCTACTCCCACCGGAGGCTGGTGGTGCTCCAGTAAGTTCCCCGCCATCTCCACCATTACCTCCGTCGTCTTCCTTGGGACCAGCACCGTCACCAACGGGCGCTGCAAATGACAGAACAACATCAGGACCACGATCGTCCGCCATAGCTTCAACTCCGTCTGTAATTTTGTTGGGTTCCATTACAGTCGTGTTAAGCATGGTCATTAATGGCGGAATGATTATGAATTTCACTTAA 1971 55.05 MGFSRSLSLSLCIFFPSFLSLSQAYTFYVGGKDGWVLNPSETYQNWAHRNRFRVNDVLVFKYARGSDSVLLVSKEDYEKCDLKNPIVKLEDGNSEFKFDRSGAFYFVSGKQGSCEKGQKLVVVVMAMRSLPPPPSGAKSPQVSPFPPSISPYPGAKSPSGTPTLPSPPEAKPPVPSGSHSPGAKSPSASPPSGTPSSPSPSSGTPILPTPPSGTPSSPSPSESHAPVPSGSHSPGSPYPGAKSPSSSPPLPPSGTPILPSPPSGTPSSPSPSESHAPVPSSSHSPGSPYPGAKSPSSSPPSGTPSSPSPSSGTPILPSPPSGTPSSPSPSESHAPGSPYPGAQSPSGSPPSRTPTSPSPSSGIPTSPSPSGFETPVSTPVPAGSPSSPYPGAKSPSSGTPTSPSPSGSETPVTTPVPVGSPTSPYPGAKSPSSGTPTSPSPAGSETPVTTPTPAGSPISPYPGASSPSRSHISPSPSGSGTPTTTPVPAGSPTSPLPSAISPSGSPSSPLPSGAASPGTSPAGSPSSGSNSPTTSPSPAGAITPTTAPVPAFSPSSSSPITSPVLSPSSEVPVVSPVPSLLPPEAGGAPVSSPPSPPLPPSSSLGPAPSPTGAANDRTTSGPRSSAIASTPSVILLGSITVVLSMVINGGMIMNFT 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32605714 32607764 + CePI673135_11g018420.1 Cec11g1842 217054

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1842 656 MobiDBLite consensus disorder prediction 461 487 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 342 364 - -
Cec11g1842 656 Gene3D - 23 129 IPR008972 -
Cec11g1842 656 PANTHER BLUE COPPER PROTEIN 26 173 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cec11g1842 656 MobiDBLite consensus disorder prediction 576 606 - -
Cec11g1842 656 FunFam Early nodulin-like protein 1 24 129 - -
Cec11g1842 656 CDD OsENODL1_like 25 125 IPR041846 -
Cec11g1842 656 MobiDBLite consensus disorder prediction 269 291 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 241 268 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 607 628 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 218 240 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 389 416 - -
Cec11g1842 656 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055(InterPro)
Cec11g1842 656 MobiDBLite consensus disorder prediction 425 452 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 131 628 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 365 380 - -
Cec11g1842 656 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055(InterPro)
Cec11g1842 656 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Cec11g1842 656 MobiDBLite consensus disorder prediction 133 175 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 292 334 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 191 217 - -
Cec11g1842 656 MobiDBLite consensus disorder prediction 496 573 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1842 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1851 Cec-Chr2:36321797 Cec11g1842 Cec-Chr11:32605714 4.90E-35 dispersed
Cec09g2063 Cec-Chr9:37674639 Cec11g1842 Cec-Chr11:32605714 4.30E-21 dispersed
Cec10g0092 Cec-Chr10:889956 Cec11g1842 Cec-Chr11:32605714 1.90E-20 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec11g1842 . 15 147 Phytocyanin Superfamily AT5G53870 54.1 5.5e-37 152.1
Cec10g1561 . 14 127 Phytocyanin Superfamily AT3G01070 64.3 1.7e-38 156.0
Cec08g1417 . 7 169 Phytocyanin Superfamily AT2G25060 54.3 1.0e-44 176.8
Cec10g1561 . 12 178 Phytocyanin Superfamily AT5G15350 52.1 8.1e-47 183.7
Cec08g1417 . 16 171 Phytocyanin Superfamily AT4G31840 55.8 5.4e-46 181.0
Cec01g1680 . 12 125 Phytocyanin Superfamily AT3G18590 61.2 6.3e-37 151.0
Cec11g1842 . 15 147 Phytocyanin Superfamily AT5G53870 54.1 5.5e-37 152.1
Cec01g1680 . 12 125 Phytocyanin Superfamily AT3G18590 61.2 6.3e-37 151.0
Cec10g0092 . 5 151 Phytocyanin Superfamily AT1G64640 55.1 6.4e-37 151.0
Cec08g1417 . 9 176 Phytocyanin Superfamily AT5G25090 51.4 5.1e-39 157.9
Cec08g1417 . 7 169 Phytocyanin Superfamily AT2G25060 54.3 1.0e-44 176.8
Cec08g1417 . 16 171 Phytocyanin Superfamily AT4G31840 55.8 5.4e-46 181.0
Cec10g1561 . 14 127 Phytocyanin Superfamily AT3G01070 64.3 1.7e-38 156.0
Cec10g1561 . 12 178 Phytocyanin Superfamily AT5G15350 52.1 8.1e-47 183.7
Cec02g2381 . 11 229 Phytocyanin Superfamily AT1G08500 56.4 1.6e-63 239.6
Cec03g1467 . 29 135 Phytocyanin Superfamily AT2G27035 60.7 2.2e-38 155.6