Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1886 ATGACCAACTCTTCCTGGGATCTCTTCTTCTTCTTCTTCTTCCCTCCTCCGGGTTCTTTTCTATCTGATTCACATTTCCCAAATACCCCTTTCAAGATTTTTTGTGTTCTTCGTCAGGATCTGGGGTTATTGGAAATGGTGAAAATGAAGTTTGTTTCCATGTCTATGGTTATGTCTGTCGTCTTGTTCATGTGTATTGGATCTTATGCCTCTTTCACTCCCATTGATAACTATTTGATATCGTGTGGTTCTACACAAAACATCACCTTCCAAGGGAGAACGTTTGTTCCTGATTCTGGACATTCATTGCTCTCCAATGATGGTGAAAGCTCTGTTGTTGTTAGTTCAAAAGGCACTACTGCTCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACGAGCATTGCTTCGTATAAATTCGAAATCAAGAAAGAAGGCCGGCATTGGGTTCGATTGTATTTTTATCCTATTCCAAAGTCAGAGAGGAATCTTGCATCTGCATCAATTACTGTTGTTACTGAGAAGTTTGTGCTGTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTCACTTCAGATTCCTTGACCCTTACTTTCATTCCGTCCAATGGTTCTGTTTCATTTGTTAATGCGATTGAAGTTGTCTCAGTGCCTGATGAGCTGATACCTGACCAAGCATTGGCTTTGAATCCATCTGCTCCTTTTAGCGGTATCTCGGAACTTGCTTTTGAAACTGTTTACCGGCTGAATATGGGGGGTCCTTTACTCACTTCACAAAATGATACGCTTGGAAGGACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAACCCCGGGAGCATAAAATATCATGCCGGTGTGACACCAGAAACTGCACCAAATTGGGTTTATGCGACTGCCGATGCCATGGGAGACCCAAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTTCAATACTTTGTCAGGGTGCACTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTTTTCAATCTTTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTATCGTCGTTAACCGGTGACTTAGGTGTGCCTTATTACAAAGACTTCATTTCCAACTCAGCAGATTCGACTACTTTGACCGTTAGTGTCGGTCCAGATACAATGGCAGACATCACCAATGCAACCATGAACGGATTGGAGATTATGAAGATAAGCAACCAAGCTGGGAGCTTGGATGGAACTTCATCTGTTGAAAGTCTTTTCCCAGATGCGCCTTCAAAGAAGAACAATATAGCAATCATTGTTGGTTGTGTCTTGGGAGCTGTAGTTGGCCTTGCTGTGCTCATCTTGTGTTATTGCTGTTACATAGGACGCAAGTCAAAGACTACTCAACCACCACACCCTTGGCTGCCTTTGCCCTTATATGGGAACTCTCAAACCATTACAAAAGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCATTTCTTTGGCTTCCTCCAGTCTCGGCAGATTCTTCACATTTCAGGAAATTCTTGATGCTACCAACAAATTTGACGAAAATCTGCTCCTTGGAGTTGGTGGTTTTGGTAGAGTTTACAAGGGAACACTTGAAGATGGTATGAAAGTTGCTGTTAAAAGAGGTAACCCCAGATCAGAACAAGGTCTTGCCGAATTTCGAACTGAAATAGAAATGTTATCAAAGCTCCGACATCGTCACCTAGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCAAATGGACCTCTCAGGAGTCACTTGTATGGAACAGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGGGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTTAAAACCACAAACATTCTCTTGGACGAGAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGGCGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTTGTGCTAATGGAAGTTCTCTGCACGAGGCCAGCGCTAAACCCTGTTCTGCCCCGAGAACAAGTCAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATTATGGACCCAAATCTGGTAGGTAAAGTTAATCCAGCATCACTTAAGAAGTTTGGTGAAACAGCTGAGAAGTGTCTGGCCGAGTATGGGGTTGACAGGCCATCTATGGGAGACGTCCTGTGGAACCTGGAATATGCTCTTCAGCTCGAGGAAACTTCATCTGCTCTAATGGAACCTGAAGACAACAGCACAAATCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAATAGTGTAAGCATGATTGATGGAGGGAACTCTGGCACCGACGATGATGCAGAAGATGCTGCAACAAGTGCAGTATTTTCACAGCTCGTAAATCCTCGTGGGAGATGA 2664 43.13 MTNSSWDLFFFFFFPPPGSFLSDSHFPNTPFKIFCVLRQDLGLLEMVKMKFVSMSMVMSVVLFMCIGSYASFTPIDNYLISCGSTQNITFQGRTFVPDSGHSLLSNDGESSVVVSSKGTTAPSPIYQSARVFTSIASYKFEIKKEGRHWVRLYFYPIPKSERNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELIPDQALALNPSAPFSGISELAFETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSANPGSIKYHAGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSSLTGDLGVPYYKDFISNSADSTTLTVSVGPDTMADITNATMNGLEIMKISNQAGSLDGTSSVESLFPDAPSKKNNIAIIVGCVLGAVVGLAVLILCYCCYIGRKSKTTQPPHPWLPLPLYGNSQTITKVSTTSQKSGTASFISLASSSLGRFFTFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 887
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33090248 33094771 + CePI673135_11g018860.1 Cec11g1886 217098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1886 887 ProSitePatterns Protein kinases ATP-binding region signature. 552 574 IPR017441 GO:0005524(InterPro)
Cec11g1886 887 Pfam Malectin-like domain 80 430 IPR024788 -
Cec11g1886 887 CDD STKc_IRAK 552 817 - -
Cec11g1886 887 FunFam Receptor-like protein kinase FERONIA 252 432 - -
Cec11g1886 887 SUPERFAMILY Protein kinase-like (PK-like) 523 817 IPR011009 -
Cec11g1886 887 ProSiteProfiles Protein kinase domain profile. 546 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1886 887 FunFam Putative receptor-like protein kinase 77 228 - -
Cec11g1886 887 Gene3D Transferase(Phosphotransferase) domain 1 622 839 - -
Cec11g1886 887 FunFam Receptor-like protein kinase FERONIA 622 838 - -
Cec11g1886 887 SMART serkin_6 546 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1886 887 Pfam Protein tyrosine and serine/threonine kinase 552 743 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1886 887 Gene3D - 251 432 - -
Cec11g1886 887 Gene3D - 77 227 - -
Cec11g1886 887 Gene3D Phosphorylase Kinase; domain 1 505 621 - -
Cec11g1886 887 PANTHER OS03G0124300 PROTEIN-RELATED 53 485 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cec11g1886 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1886 887 FunFam receptor-like protein kinase FERONIA 508 621 - -
Cec11g1886 887 MobiDBLite consensus disorder prediction 851 872 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1755 Cec-Chr2:35318428 Cec11g1886 Cec-Chr11:33090248 5.70E-178 dispersed
Cec04g1768 Cec-Chr4:36617656 Cec11g1886 Cec-Chr11:33090248 9.90E-64 dispersed
Cec05g0996 Cec-Chr5:8741943 Cec11g1886 Cec-Chr11:33090248 5.10E-208 dispersed
Cec06g1798 Cec-Chr6:31457423 Cec11g1886 Cec-Chr11:33090248 6.60E-238 dispersed
Cec09g0234 Cec-Chr9:2017553 Cec11g1886 Cec-Chr11:33090248 2.90E-225 dispersed
Cec10g2066 Cec-Chr10:35385036 Cec11g1886 Cec-Chr11:33090248 7.70E-70 dispersed
Cec11g0503 Cec-Chr11:5342002 Cec11g1886 Cec-Chr11:33090248 1.20E-122 dispersed
Cec11g1375 Cec-Chr11:28024879 Cec11g1886 Cec-Chr11:33090248 4.10E-163 dispersed
Cec11g1723 Cec-Chr11:31497152 Cec11g1886 Cec-Chr11:33090248 2.00E-64 dispersed
Cec11g1886 Cec-Chr11:33090248 Cec10g1162 Cec-Chr10:25380428 2.80E-66 dispersed
Cec01g0796 Cec-Chr1:8786590 Cec11g1886 Cec-Chr11:33090248 2.10E-50 transposed
Cec02g1439 Cec-Chr2:31729023 Cec11g1886 Cec-Chr11:33090248 5.10E-184 transposed
Cec02g2167 Cec-Chr2:39119857 Cec11g1886 Cec-Chr11:33090248 9.70E-239 transposed
Cec04g1406 Cec-Chr4:33706599 Cec11g1886 Cec-Chr11:33090248 5.30E-111 transposed
Cec04g2228 Cec-Chr4:40049639 Cec11g1886 Cec-Chr11:33090248 1.20E-191 transposed
Cec06g0157 Cec-Chr6:1597080 Cec11g1886 Cec-Chr11:33090248 9.60E-70 transposed
Cec11g1886 Cec-Chr11:33090248 Cec08g0971 Cec-Chr8:21528929 2.60E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72433 PF12819 Malectin_like 4.80E-39 CL0202 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1886 - - - 0.0