Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec11g1894 | ATGCGGATTGCTGTTGCAGAAGAGGCTGGTGTTTTTTGGGTTGAGAGTGTGGTGAATTTGGGGTGGAATTCTGTGAAATTTTGGAATTTGAAGTACTGGGGTTTTGGCAAAATGATGTTATCCGCGTCGCCTTCGGCAATAGCTCGAAGCTCACTGGAGGAAATGCTTGATTCACTTCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCCACTTCGAAGGCTCGGATTCCGCCGGTGAAGCGGGCTTTACCCGTCAATTTCAGGGTTAATGATGACGGTTCCTCAGAGTGCTCTATTAATGTCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTGGGTAACTTTGCATTCAGGAGAATAAAGGGAGATCATGACGATGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATAGAGATCAAGTGTATGGCTCGAATGGTGCTTCTGCTTTACTTTCAAATATTCAAGGGTCTAATTGGGAGGACAATATCAGTTATTTTCTTCATAAGAAACTCCGGGTTTGGTGTCAACTTCCAACTGGACAATGGGAGTTAGGAACTATACAGTCAAACAGTGGGGTGGAGGCATCTGTCATGCTCTCAAACAAAAAGGTTGTTAAAGTTTCAACAGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGCACAGCTCGGTTATTTGAATGAGCCTTCGGTTATTCACAGTCTCCAGAGAAGATTTTCTCGGGATAAAATTTATAGTAATGCTGGGTCAGTTTTGATTGCAGTCAATCCCTTGAAAGACACTAAACAGTATGGAAATGGATTAATTACAGCCTATAGACAGAGAGTCATGAATGACCCTCATGTTTATGCTATAGCTGATTCTGCCTATTCTGCGATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGTGGAGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAAGCTGCAGTTCAATACTTGGCTGCTCTTGGTGGCGGCAGTGGCATAGATGATAGAATCCCACAGGCGAATGTTATACTGGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCTAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACATTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAGAGATCATTCCATGTCTTTTATCAACTTTGTGCTGGAGCATCATCTACACTTAAAGAGAAATTGAATATCAGAGTGGCTAGTGAGTACTGTTACCTTAATCACAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATACACTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCAGTGTTGTGGATAGGAAACATTACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCTGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAGTCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGGCAACCGATGCAAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAAGAACGGAGCATTCTGGAAGATCCATAAATATTCTTGACTTCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGACTATGAATTTAATGGGGTCGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCTCTTGGAGTTCTGGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATCTTACATTTGCTAATAAACTAAAGCAACACTTTAAGTCTCAACCTCGCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTATTCGCCATTATGCTGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGCTGCATTCCGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGCTACTGCAATTACTTGCCTCAAAACTGATTAACCATTCCCAGAAACCAACAGTTTCAATGTGCTCTACAGAAGTAGTAGAATCCCCCGAGCCAGGTGTTGGTACCAAGTACAAGCTTCTACTATTTGACCTATTTCATAAATTGGAGTACACCAGCCATCATTTCATTTGTTGCATAAGGCCGAACAGAAATCAAGTTGGTGGTTTATTTGAGGAGGACCTTGTCCTACAACAGCTTCGGTACTGTGGAATTTTGGAAGTTGTGAGAATTTCAAGATCTGGATATCCTACCAGAATGACGCATCACGAATTTGCTGGAAGGTATGGATTCCTCCTTAAAGAAACTGGTGCATCTCGAGATCCATTGAGTATATCAATTGCTGTTCTACAACAATTTAATGTCCACCCCGAGATGTACCACGTTGGTTATACCAAACTATTTTTCCGAACTGGGCAGATTAGGGCATTGGATGAAAGGAGGAAGCAAGTTATGCAAGGCATCCTAGGGGTACAAAAGTACTTTCGTGGTTGCCATTCCCGTGGCAACTTCCATGATCTTAAGCAAGGGGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTACCGTTAAGATGAAGAGGTTATCATTCGTTGTGTATGCTTTTAGCGTTCCTAAGAAGGCTTACGAACTCCAGGGAATCATACGTTTACAATCTGTCATACGTGGTTCATTGGCTCGAAAGCATTTTCGGAGCATGCGTGATTCAAAGAGGGATTTTCCTGAAAACAAGAAATCTAAACTGACAACAGGCAGAAGGGTTTCAGAGGAAGAATTTCAAGAACGGGTTCAATCCTTGCCAACAACTCTGACTGAGCTTCAAAAGAGGGTACTGGAGGCAGAAGCAACCATAGAGAAAAAGGAAGGGGAAAATGCTGCACTGCGGGAGCAAGTAAAACAATTCGAGTCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTGCTGAAAATGTAGCCTGTCCACCAGGAAGAGTCGATGCTGGTAACTCACCACCTCACTATTATGATTCTGAGGATACGATGTCAATGGGATCCCGAACACCTGGTGGTACCACACCTATAAAGGCTTCTGGAATTTCTGAAGTTGGAGCAGGCCGAGAAATGAATGGTACTTTAGTGGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGAAGAACTGCATTTGACGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAGACAGGGTCTAATTTAAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAAAAAGAGTACAAAGCTAGATTAAGGGAAACAAAAGCTAAGTTCAGCTTTGTGAATGAATGGAGAGCTCTTGAAAAGAAGGGGGAGAAAACTGTTGAGTTGTCTTCTGACAACATGTGGGTGTTGAAGCTGAACCTGATAAAGCCGAGAAATGTGTCGCCCATTCGTGGGATGGAAGTAGAGTGTTCAGAAGATTGTGTATAG | 3840 | 41.95 | MRIAVAEEAGVFWVESVVNLGWNSVKFWNLKYWGFGKMMLSASPSAIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPTSKARIPPVKRALPVNFRVNDDGSSECSINVFNGREDAMRKENGLGNFAFRRIKGDHDDESPYMVASENDNRDQVYGSNGASALLSNIQGSNWEDNISYFLHKKLRVWCQLPTGQWELGTIQSNSGVEASVMLSNKKVVKVSTVDLLPANPDIVEGVDDLAQLGYLNEPSVIHSLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNGLITAYRQRVMNDPHVYAIADSAYSAMMQDEVNQSIIISGESGAGKTETAKAAVQYLAALGGGSGIDDRIPQANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGASSTLKEKLNIRVASEYCYLNHSECLVIGGVDDARKFHILVEALDTLQFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVANAAKLMGCSPNELKLVLSTHKVQSGNGSIAKKLTLRQATDARDALAKFIYASLFDWLVEQINKSLKPRTEHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKKPLGVLALLDEELNFPKATDLTFANKLKQHFKSQPRFKGERGRAFGIRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLLASKLINHSQKPTVSMCSTEVVESPEPGVGTKYKLLLFDLFHKLEYTSHHFICCIRPNRNQVGGLFEEDLVLQQLRYCGILEVVRISRSGYPTRMTHHEFAGRYGFLLKETGASRDPLSISIAVLQQFNVHPEMYHVGYTKLFFRTGQIRALDERRKQVMQGILGVQKYFRGCHSRGNFHDLKQGATTLQSFIRGENARRRCTVKMKRLSFVVYAFSVPKKAYELQGIIRLQSVIRGSLARKHFRSMRDSKRDFPENKKSKLTTGRRVSEEEFQERVQSLPTTLTELQKRVLEAEATIEKKEGENAALREQVKQFESRRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLAAENVACPPGRVDAGNSPPHYYDSEDTMSMGSRTPGGTTPIKASGISEVGAGREMNGTLVAVNNLVKEFEQRRTAFDDDAKALIEAKSGQAQTGSNLNPDEEYRKIKVRFEAWKKEYKARLRETKAKFSFVNEWRALEKKGEKTVELSSDNMWVLKLNLIKPRNVSPIRGMEVECSEDCV | 1279 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 33162329 | 33172825 | + | CePI673135_11g018940.1 | Cec11g1894 | 217106 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec11g1894 | 1279 | MobiDBLite | consensus disorder prediction | 63 | 84 | - | - | |
| Cec11g1894 | 1279 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 210 | 995 | IPR027417 | - | |
| Cec11g1894 | 1279 | Gene3D | Kinesin motor domain | 233 | 838 | IPR036961 | - | |
| Cec11g1894 | 1279 | PANTHER | MYOSIN | 185 | 1243 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cec11g1894 | 1279 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 181 | 230 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | Pfam | Myosin head (motor domain) | 236 | 893 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | FunFam | Myosin heavy chain | 416 | 472 | - | - | |
| Cec11g1894 | 1279 | SMART | MYSc_2a | 228 | 906 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | SMART | iq_5 | 906 | 928 | IPR000048 | GO:0005515(InterPro) | |
| Cec11g1894 | 1279 | SMART | iq_5 | 929 | 951 | IPR000048 | GO:0005515(InterPro) | |
| Cec11g1894 | 1279 | SMART | iq_5 | 971 | 993 | IPR000048 | GO:0005515(InterPro) | |
| Cec11g1894 | 1279 | FunFam | Myosin IE heavy chain | 473 | 581 | - | - | |
| Cec11g1894 | 1279 | Gene3D | - | 416 | 472 | - | - | |
| Cec11g1894 | 1279 | Pfam | IQ calmodulin-binding motif | 975 | 993 | IPR000048 | GO:0005515(InterPro) | |
| Cec11g1894 | 1279 | Pfam | IQ calmodulin-binding motif | 933 | 950 | IPR000048 | GO:0005515(InterPro) | |
| Cec11g1894 | 1279 | CDD | MYSc_Myo8 | 248 | 893 | IPR036022 | - | |
| Cec11g1894 | 1279 | ProSiteProfiles | IQ motif profile. | 930 | 958 | - | - | |
| Cec11g1894 | 1279 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 473 | 581 | - | - | |
| Cec11g1894 | 1279 | ProSiteProfiles | Myosin motor domain profile. | 234 | 905 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | Coils | Coil | 1032 | 1080 | - | - | |
| Cec11g1894 | 1279 | Gene3D | - | 911 | 958 | - | - | |
| Cec11g1894 | 1279 | PRINTS | Myosin heavy chain signature | 592 | 620 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | PRINTS | Myosin heavy chain signature | 645 | 673 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | PRINTS | Myosin heavy chain signature | 360 | 387 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | PRINTS | Myosin heavy chain signature | 318 | 343 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | PRINTS | Myosin heavy chain signature | 264 | 283 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec11g1894 | 1279 | ProSiteProfiles | IQ motif profile. | 972 | 1001 | - | - | |
| Cec11g1894 | 1279 | MobiDBLite | consensus disorder prediction | 995 | 1021 | - | - | |
| Cec11g1894 | 1279 | Gene3D | - | 839 | 906 | - | - | |
| Cec11g1894 | 1279 | Gene3D | - | 604 | 795 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g1492 | Cec-Chr2:32471013 | Cec11g1894 | Cec-Chr11:33162329 | 0.00E+00 | dispersed | |
| Cec06g0135 | Cec-Chr6:1338131 | Cec11g1894 | Cec-Chr11:33162329 | 1.00E-145 | dispersed | |
| Cec09g0785 | Cec-Chr9:7204365 | Cec11g1894 | Cec-Chr11:33162329 | 9.10E-139 | dispersed | |
| Cec11g1894 | Cec-Chr11:33162329 | Cec05g0435 | Cec-Chr5:3543262 | 1.40E-151 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec11g1894 | K10357 | - | csv:101210624 | 2112.81 |