Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1912 ATGCCACGTGTCAGTCATCAATCTAAGCGCCCTCAGTGGGCATCTCACTGTTTGGAATTTGGATTTCTATTCCCTCTTTTCTTAATTTCCCCATCTTTTCTTTTACCTTCTTTGCTTCTAAAAAACTACGACCACCGACCCACTTCCAGACTGCGAGAAGAGTGGGGGCGGACAGAAGCGGCGGCGTACGGCGGAGAGAGGACAGGGAGAGAGATCGCTCCGGCTACTGATGGATGTTTTTCGAAGTTGTCTCTCTCTCGCTTGTTTAGTGGAAGCACCGGCTGGCACTCATTAGCAACTGTAACCTGTTTGATCAAAAGTCTTAAAGGAACTTTGAGAGTTCTTGATTTTAGAAGGTTGGTTTTTGCGATTCACGATCTGGGTATTGCGCTTCTTGACGGATTCTTCTCTCATTCTTTTGAAGTGAAGGAAATGGTTCGATCGGATGAGAATAACCCCGGAGTGATCGGACGGGCAAATCTTCATGGGAGTATACGAATTGGTGGTTGTGGCGGTGGCAAATTTGTGGTGGGGATGGGTCAAAACCGCACAGCTTTGAGCAGCATTAATGAAAATGTTGCAGCAGCTCCTCCTGCCCCTCATCCCTGTGCAGTCCTCAAAAGAGGCCTAACAGAAACTGATGTTGTTGTCAACAATAAAGACCCACCGATTCCAATTCATCGACCTATCACTCGGAAGTTTGCAGCTCAGCTGGCCAATAAGCAGCAGCCACCTGTGCCTGAGGTTGATAAAAAGCCACTTGAATCTGCTCCAACTCGAAAAGAGTCTTCAGATCATCATCCCATTGTTGAGGAAGATGATTCCATGGGTGAATCAGCAGTTCCGATGTTTGTTCAACACACAGAAGCAATGTTGGACGAAATTGACAGAATGGAGGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTAATTGATATAGACAGCCGTGATAAGAAGGATCAACTAGCTGTTGTGGAGTACATTGATGACTTGTATGCTTTCTACAGGAAATCCGAGGTTTCTGGCTGTGTCCCACCAAACTACATGGCTCAACAAGCAGATATTAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGTACACTACAAATTTGAGCTGATGGAGGAGACATTGTACCTAACAGTCAACCTGATTGATAGATTCTTAGCGGTTCAGTCAGTGGTGAGAAAGAAGCTTCAGCTTGTTGGAGTGACGGCCATGCTTATAGCCTGCAAGTATGAAGAGGTTTCTGTTCCTGTTGTGGATGATCTTATTCTCATATCTGATAAAGCCTACACCCGAAAAGAAGTTCTGGACATGGAGAAGTTGATGATAAATACCTTACAGTTCAATCTGTCTGTTCCAACACCTTATGTCTTCATGAGGAGGTTTCTCAAAGCTGCACAATCTGATAGAGAGCTGGACCTGCTCTCCTTCTTCATGGTGGAGCTGTGTCTAGTGGAATATGAAATGCTGAAGTATAGACCTTCATTAATGGCTGCTGCTGCAGTCTTCACTGCTCAATGCACAGTGAATGGCTTCAAAGAATGGAGCAAAACCAGTGAGTGGCACACTGGCTACTCACAGGAACAACTTCTGGAATGTTCAAGGCTGATGGTGGGGTTCCATCAGAAAGCAGGGACAGGGAAATTGACAGGAGTTCACAGGAAGTATTGTACATCCAAGTTTGGATATGCTGCTAGAAATTCTGGGTCCAGTTGGGTTCTTCTAGCAATTTCTGGATATCCTGTGATAGAGATATTTGAATAG 1782 45.12 MPRVSHQSKRPQWASHCLEFGFLFPLFLISPSFLLPSLLLKNYDHRPTSRLREEWGRTEAAAYGGERTGREIAPATDGCFSKLSLSRLFSGSTGWHSLATVTCLIKSLKGTLRVLDFRRLVFAIHDLGIALLDGFFSHSFEVKEMVRSDENNPGVIGRANLHGSIRIGGCGGGKFVVGMGQNRTALSSINENVAAAPPAPHPCAVLKRGLTETDVVVNNKDPPIPIHRPITRKFAAQLANKQQPPVPEVDKKPLESAPTRKESSDHHPIVEEDDSMGESAVPMFVQHTEAMLDEIDRMEEVEMEDIEEEPVIDIDSRDKKDQLAVVEYIDDLYAFYRKSEVSGCVPPNYMAQQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYTRKEVLDMEKLMINTLQFNLSVPTPYVFMRRFLKAAQSDRELDLLSFFMVELCLVEYEMLKYRPSLMAAAAVFTAQCTVNGFKEWSKTSEWHTGYSQEQLLECSRLMVGFHQKAGTGKLTGVHRKYCTSKFGYAARNSGSSWVLLAISGYPVIEIFE 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33326601 33334942 - CePI673135_11g019120.1 Cec11g1912 217124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1912 593 FunFam G2/mitotic-specific cyclin-1 436 571 - -
Cec11g1912 593 PANTHER CYCLINS 307 563 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec11g1912 593 CDD CYCLIN_AtCycB-like_rpt1 310 454 - -
Cec11g1912 593 SMART Cyclin_C_2 459 576 IPR004367 -
Cec11g1912 593 MobiDBLite consensus disorder prediction 253 274 - -
Cec11g1912 593 Pfam Cyclin, C-terminal domain 459 571 IPR004367 -
Cec11g1912 593 CDD CYCLIN_AtCycB-like_rpt2 459 572 - -
Cec11g1912 593 SMART cyclin_7 463 545 IPR013763 -
Cec11g1912 593 SMART cyclin_7 366 450 IPR013763 -
Cec11g1912 593 SUPERFAMILY Cyclin-like 458 572 IPR036915 -
Cec11g1912 593 ProSitePatterns Cyclins signature. 361 392 IPR048258 -
Cec11g1912 593 SUPERFAMILY Cyclin-like 321 456 IPR036915 -
Cec11g1912 593 MobiDBLite consensus disorder prediction 238 274 - -
Cec11g1912 593 Pfam Cyclin, N-terminal domain 331 457 IPR006671 -
Cec11g1912 593 Gene3D - 345 457 - -
Cec11g1912 593 Gene3D - 331 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0653 Cec-Chr4:25420608 Cec11g1912 Cec-Chr11:33326601 1.70E-67 dispersed
Cec04g1797 Cec-Chr4:36778671 Cec11g1912 Cec-Chr11:33326601 3.00E-130 dispersed
Cec09g0240 Cec-Chr9:2086511 Cec11g1912 Cec-Chr11:33326601 7.20E-45 dispersed
Cec09g2384 Cec-Chr9:40616623 Cec11g1912 Cec-Chr11:33326601 5.10E-48 dispersed
Cec11g1912 Cec-Chr11:33326601 Cec05g1888 Cec-Chr5:30937193 5.60E-47 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1912 K21777 - csv:101223199 757.673