Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1916 ATGAGCTGTTTTTCTTGCATTCGTGCTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGAAGGGGGAAGTCGTATGCAAATGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGCTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTCGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACGTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTATGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTCGCCTGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCAAAGTTAGGACCAGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTTGGTGTAGTTCTCTTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCCTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGGCGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGGGACAGGAGTACCCGTGTTCAAGAATTAAGATACGGAAAGAGTTCAACATCCAAGTAAAGATGGCTACTCGCTTCGTATGGCTCTGTAAGGTGCATTTGCTGGCGTTAGCAAAACCCGACCAACTCCAATCTCCTGTTTAA 1164 45.45 MSCFSCIRARCKDASKVEIDNGSGRGKSYANETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEGQEYPCSRIKIRKEFNIQVKMATRFVWLCKVHLLALAKPDQLQSPV 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33394559 33397176 - CePI673135_11g019160.1 Cec11g1916 217128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1916 387 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
Cec11g1916 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1916 387 Gene3D Transferase(Phosphotransferase) domain 1 143 361 - -
Cec11g1916 387 PANTHER OS07G0668900 PROTEIN 33 342 - -
Cec11g1916 387 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Cec11g1916 387 MobiDBLite consensus disorder prediction 33 48 - -
Cec11g1916 387 SUPERFAMILY Protein kinase-like (PK-like) 50 343 IPR011009 -
Cec11g1916 387 FunFam probable serine/threonine-protein kinase RLCKVII 37 142 - -
Cec11g1916 387 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1916 387 MobiDBLite consensus disorder prediction 22 50 - -
Cec11g1916 387 ProSiteProfiles Protein kinase domain profile. 67 346 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1916 387 SMART serkin_6 67 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1916 387 FunFam Serine/threonine-protein kinase PBS1 143 353 - -
Cec11g1916 387 CDD STKc_IRAK 73 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0971 Cec-Chr8:21528929 Cec11g1916 Cec-Chr11:33394559 3.40E-154 dispersed
Cec10g1330 Cec-Chr10:27591339 Cec11g1916 Cec-Chr11:33394559 6.50E-75 dispersed
Cec10g2072 Cec-Chr10:35445360 Cec11g1916 Cec-Chr11:33394559 2.30E-121 dispersed
Cec11g1169 Cec-Chr11:23979325 Cec11g1916 Cec-Chr11:33394559 3.00E-83 dispersed
Cec11g1916 Cec-Chr11:33394559 Cec08g0991 Cec-Chr8:21709442 7.40E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72434 PF00069 Pkinase 4.70E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1916 - - - 0.0