Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1916 | ATGAGCTGTTTTTCTTGCATTCGTGCTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGAAGGGGGAAGTCGTATGCAAATGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGCTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTCGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACGTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTATGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTCGCCTGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCAAAGTTAGGACCAGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTTGGTGTAGTTCTCTTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCCTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGGCGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGGGACAGGAGTACCCGTGTTCAAGAATTAAGATACGGAAAGAGTTCAACATCCAAGTAAAGATGGCTACTCGCTTCGTATGGCTCTGTAAGGTGCATTTGCTGGCGTTAGCAAAACCCGACCAACTCCAATCTCCTGTTTAA | 1164 | 45.45 | MSCFSCIRARCKDASKVEIDNGSGRGKSYANETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEGQEYPCSRIKIRKEFNIQVKMATRFVWLCKVHLLALAKPDQLQSPV | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33394559 | 33397176 | - | CePI673135_11g019160.1 | Cec11g1916 | 217128 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1916 | 387 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 95 | IPR017441 | GO:0005524(InterPro) | |
Cec11g1916 | 387 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1916 | 387 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 361 | - | - | |
Cec11g1916 | 387 | PANTHER | OS07G0668900 PROTEIN | 33 | 342 | - | - | |
Cec11g1916 | 387 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 142 | - | - | |
Cec11g1916 | 387 | MobiDBLite | consensus disorder prediction | 33 | 48 | - | - | |
Cec11g1916 | 387 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 343 | IPR011009 | - | |
Cec11g1916 | 387 | FunFam | probable serine/threonine-protein kinase RLCKVII | 37 | 142 | - | - | |
Cec11g1916 | 387 | Pfam | Protein kinase domain | 68 | 336 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1916 | 387 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
Cec11g1916 | 387 | ProSiteProfiles | Protein kinase domain profile. | 67 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1916 | 387 | SMART | serkin_6 | 67 | 340 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1916 | 387 | FunFam | Serine/threonine-protein kinase PBS1 | 143 | 353 | - | - | |
Cec11g1916 | 387 | CDD | STKc_IRAK | 73 | 342 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g0971 | Cec-Chr8:21528929 | Cec11g1916 | Cec-Chr11:33394559 | 3.40E-154 | dispersed | |
Cec10g1330 | Cec-Chr10:27591339 | Cec11g1916 | Cec-Chr11:33394559 | 6.50E-75 | dispersed | |
Cec10g2072 | Cec-Chr10:35445360 | Cec11g1916 | Cec-Chr11:33394559 | 2.30E-121 | dispersed | |
Cec11g1169 | Cec-Chr11:23979325 | Cec11g1916 | Cec-Chr11:33394559 | 3.00E-83 | dispersed | |
Cec11g1916 | Cec-Chr11:33394559 | Cec08g0991 | Cec-Chr8:21709442 | 7.40E-32 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72434 | PF00069 | Pkinase | 4.70E-45 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1916 | - | - | - | 0.0 |