Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1922 ATGATGGAGTGGCAGAACCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTCGAGCAATTGAGCAACGCCGATGGAGTTAATGGCCTCTATGTCAAGGTGATGACCGATGAGCAAATGGAGCTTCTCAGGCAGCAGATCTCTGTCTATGCTTCCATATGTGAGCAGCTTGTCGAGATGCACAAGGCAATCACTGCCCAGCAGGACCTTGCGGGAATGAGGCTTGGGAATCTTTACTGTGATCCAATAATGGCGTCTGCTGCTGGTCACAAGATAACTGCTAGGCAGAGGTGGACGCCTACGCCTGTGCAGCTTCAAATTCTTGAGCAGATATTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTCTACAGCTGACACAGCATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGAAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCCAATAATGCAGACTCAGAACCAGAGACAGAAGTTGATTCTCCAAAGGAGAAAAAAACTAAACCAGAAACCTTCCAAACTTATGAACATTTCGTTCCCAAGTCAGGCAACATGTACTCTCAGAGAACTGATTTCAGTACTGAAATACTTTCCTTTGATGCACAGTCGAATAAAGGGGAGCCCATGTTTCAGTCATTCGGATCTGGTCATATCAGTCAGATGAATCCATTACAGAATCATAGAAATAATCTGTCAAATGATAAAATGAACATAGCGGATTACTCTCCTTACACTCCTTGTGAAGGATATCACTTGGCCGAGTGA 819 43.96 MMEWQNQQQQNQTEQLQMQMQVEQLSNADGVNGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQTYEHFVPKSGNMYSQRTDFSTEILSFDAQSNKGEPMFQSFGSGHISQMNPLQNHRNNLSNDKMNIADYSPYTPCEGYHLAE 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33420753 33422147 + CePI673135_11g019220.1 Cec11g1922 217134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1922 272 Gene3D - 101 165 - -
Cec11g1922 272 CDD homeodomain 99 161 IPR001356 GO:0003677(InterPro)
Cec11g1922 272 MobiDBLite consensus disorder prediction 174 188 - -
Cec11g1922 272 SUPERFAMILY Homeodomain-like 98 161 IPR009057 -
Cec11g1922 272 ProSiteProfiles 'Homeobox' domain profile. 95 160 IPR001356 GO:0003677(InterPro)
Cec11g1922 272 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 247 IPR044559 GO:0003700(InterPro)
Cec11g1922 272 SMART HOX_1 97 164 IPR001356 GO:0003677(InterPro)
Cec11g1922 272 MobiDBLite consensus disorder prediction 157 188 - -
Cec11g1922 272 Pfam Homeodomain 99 159 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0030 Cec-Chr10:388644 Cec11g1922 Cec-Chr11:33420753 1.10E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30589 PF00046 Homeodomain 8.60E-18 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1922 - - - 0.0