Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1929 ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACTCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAGATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGAGCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGACATAGTCTGAGCTCCATAAAGCTCCTTGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCGGGATACTTACCTGTCTTTAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATAGATGATCTTGTTGAACATGTCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGACGCTGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTGGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTTTGCTTTTGCTGATACTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTGACTGCTTTCATTTTTGGAAGAACAATGATTATTGCGAATGCTGGGGATTGTCGAGCTGTTCTGGGGAGGAGGGGGAAGGCTATCGAGGTGTCGAAGGATCACAAGCCCAACTGTGCTTCTGAAAAGCTCAGAATTGAGAAACTGGGTGGGGTGATCTATGATGGGTACCTCAATGGCCAGCTCTCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCCAAGGGTTCTGCTTGCCCACTGAGTGCCGAGCCAGAGCTGCAGGAACTGAATTTGACGGAGGAAGATGAATTTCTAATAATGGGATGCGATGGGCTTTGGGATGTGATGAGCAGCCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCAGAAAGGTGTTCAAGAGAGCTGGTAAGGGAGGCACTAAAGCGCAATACATGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCGGCTGATCCGCCCCCTCGGATAGAAATTCCTCAAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAGGGTGTATTGGACTGCAATTCTTGA 1161 45.82 MATGIDFSPPFTLLEGGGYNKDNVSATDDESSDSFNSLKQMSSGKPPRHLSVMRHSLSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHVHACADFTSPGAFYGVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADFAFADTSSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQTRVRRSISLEGLNLLKGVLDCNS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33458689 33461978 - CePI673135_11g019290.1 Cec11g1929 217141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1929 386 MobiDBLite consensus disorder prediction 29 44 - -
Cec11g1929 386 FunFam Probable protein phosphatase 2C 22 76 354 - -
Cec11g1929 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169(InterPro)
Cec11g1929 386 MobiDBLite consensus disorder prediction 18 49 - -
Cec11g1929 386 Gene3D - 76 354 IPR036457 -
Cec11g1929 386 PANTHER PROTEIN PHOSPHATASE 2C 68 351 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec11g1929 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Cec11g1929 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Cec11g1929 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Cec11g1929 386 SMART PP2C_4 81 349 IPR001932 -
Cec11g1929 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Cec11g1929 386 CDD PP2Cc 90 351 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1796 Cec-Chr2:35831446 Cec11g1929 Cec-Chr11:33458689 1.10E-88 dispersed
Cec06g0432 Cec-Chr6:4890063 Cec11g1929 Cec-Chr11:33458689 3.10E-80 dispersed
Cec09g0335 Cec-Chr9:2781364 Cec11g1929 Cec-Chr11:33458689 3.90E-30 dispersed
Cec11g1929 Cec-Chr11:33458689 Cec09g0479 Cec-Chr9:4063707 1.50E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1929 K14803 - csv:101205355 761.14