Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1943 ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCAAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAGGACGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCCGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA 939 46.86 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33537186 33539040 + CePI673135_11g019430.1 Cec11g1943 217155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1943 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1943 312 SMART serkin_6 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1943 312 FunFam Cyclin-dependent kinase 2 102 311 - -
Cec11g1943 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1943 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Cec11g1943 312 PANTHER CELL DIVISION PROTEIN KINASE 14 304 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)
Cec11g1943 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524(InterPro)
Cec11g1943 312 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Cec11g1943 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1943 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Cec11g1943 312 FunFam Cyclin-dependent kinase B2,2 10 100 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0733 Cec-Chr4:26538802 Cec11g1943 Cec-Chr11:33537186 2.30E-121 dispersed
Cec05g2384 Cec-Chr5:35169465 Cec11g1943 Cec-Chr11:33537186 1.90E-92 dispersed
Cec08g1699 Cec-Chr8:28168685 Cec11g1943 Cec-Chr11:33537186 2.70E-35 dispersed
Cec10g0114 Cec-Chr10:1058275 Cec11g1943 Cec-Chr11:33537186 1.70E-51 dispersed
Cec10g1417 Cec-Chr10:28519133 Cec11g1943 Cec-Chr11:33537186 1.20E-43 dispersed
Cec11g1444 Cec-Chr11:28606514 Cec11g1943 Cec-Chr11:33537186 5.30E-70 dispersed
Cec11g1943 Cec-Chr11:33537186 Cec03g1707 Cec-Chr3:35313914 2.20E-47 dispersed
Cec11g1943 Cec-Chr11:33537186 Cec08g1784 Cec-Chr8:28927488 5.90E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72435 PF00069 Pkinase 7.50E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1943 K07760 - csv:101208001 624.78