Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1943 | ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCAAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAGGACGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCCGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA | 939 | 46.86 | MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33537186 | 33539040 | + | CePI673135_11g019430.1 | Cec11g1943 | 217155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1943 | 312 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1943 | 312 | SMART | serkin_6 | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1943 | 312 | FunFam | Cyclin-dependent kinase 2 | 102 | 311 | - | - | |
Cec11g1943 | 312 | Pfam | Protein kinase domain | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1943 | 312 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 100 | - | - | |
Cec11g1943 | 312 | PANTHER | CELL DIVISION PROTEIN KINASE | 14 | 304 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER) | |
Cec11g1943 | 312 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524(InterPro) | |
Cec11g1943 | 312 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 308 | IPR011009 | - | |
Cec11g1943 | 312 | ProSiteProfiles | Protein kinase domain profile. | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1943 | 312 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 311 | - | - | |
Cec11g1943 | 312 | FunFam | Cyclin-dependent kinase B2,2 | 10 | 100 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0733 | Cec-Chr4:26538802 | Cec11g1943 | Cec-Chr11:33537186 | 2.30E-121 | dispersed | |
Cec05g2384 | Cec-Chr5:35169465 | Cec11g1943 | Cec-Chr11:33537186 | 1.90E-92 | dispersed | |
Cec08g1699 | Cec-Chr8:28168685 | Cec11g1943 | Cec-Chr11:33537186 | 2.70E-35 | dispersed | |
Cec10g0114 | Cec-Chr10:1058275 | Cec11g1943 | Cec-Chr11:33537186 | 1.70E-51 | dispersed | |
Cec10g1417 | Cec-Chr10:28519133 | Cec11g1943 | Cec-Chr11:33537186 | 1.20E-43 | dispersed | |
Cec11g1444 | Cec-Chr11:28606514 | Cec11g1943 | Cec-Chr11:33537186 | 5.30E-70 | dispersed | |
Cec11g1943 | Cec-Chr11:33537186 | Cec03g1707 | Cec-Chr3:35313914 | 2.20E-47 | dispersed | |
Cec11g1943 | Cec-Chr11:33537186 | Cec08g1784 | Cec-Chr8:28927488 | 5.90E-72 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72435 | PF00069 | Pkinase | 7.50E-71 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1943 | K07760 | - | csv:101208001 | 624.78 |