Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1947 | ATGTTTCTACTGCGACCTGAGGCTCCAACCCCGCCGTTCCGTCCGATCCCGGAAGAGACCCCCAGCCTCCTTTCTCGAATGACTACAAATCCACTCCTCCATCCCCACCTGGAGGAAGAGACGTATTTAAGGAATGCAAGTAATTGCGGAAGTGGTACTGGTTTGGTAGTGGGTGTGTGGGCAATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCATTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATTGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAATTCTAA | 822 | 48.3 | MFLLRPEAPTPPFRPIPEETPSLLSRMTTNPLLHPHLEEETYLRNASNCGSGTGLVVGVWAMATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLHSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKF | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33555633 | 33559034 | + | CePI673135_11g019470.1 | Cec11g1947 | 217159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1947 | 273 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cec11g1947 | 273 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 62 | 266 | IPR036291 | - | |
Cec11g1947 | 273 | Pfam | NAD dependent epimerase/dehydratase family | 71 | 258 | IPR001509 | - | |
Cec11g1947 | 273 | Coils | Coil | 113 | 133 | - | - | |
Cec11g1947 | 273 | CDD | FR_SDR_e | 71 | 273 | - | - | |
Cec11g1947 | 273 | Gene3D | - | 62 | 273 | - | - | |
Cec11g1947 | 273 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 70 | 267 | IPR050425 | GO:0016616(PANTHER) | |
Cec11g1947 | 273 | FunFam | Dihydroflavonol reductase | 68 | 273 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g1308 | Cec-Chr10:27307948 | Cec11g1947 | Cec-Chr11:33555633 | 1.50E-54 | dispersed | |
Cec10g1309 | Cec-Chr10:27325638 | Cec11g1947 | Cec-Chr11:33555633 | 7.50E-54 | dispersed | |
Cec02g1119 | Cec-Chr2:24629572 | Cec11g1947 | Cec-Chr11:33555633 | 4.60E-43 | transposed | |
Cec03g0031 | Cec-Chr3:333744 | Cec11g1947 | Cec-Chr11:33555633 | 6.60E-50 | transposed | |
Cec09g0328 | Cec-Chr9:2728873 | Cec11g1947 | Cec-Chr11:33555633 | 5.80E-57 | transposed | |
Cec10g0741 | Cec-Chr10:10985064 | Cec11g1947 | Cec-Chr11:33555633 | 6.20E-48 | transposed | |
Cec11g1947 | Cec-Chr11:33555633 | Cec08g1004 | Cec-Chr8:21910820 | 2.00E-07 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1947 | - | - | - | 0.0 |