Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1947 ATGTTTCTACTGCGACCTGAGGCTCCAACCCCGCCGTTCCGTCCGATCCCGGAAGAGACCCCCAGCCTCCTTTCTCGAATGACTACAAATCCACTCCTCCATCCCCACCTGGAGGAAGAGACGTATTTAAGGAATGCAAGTAATTGCGGAAGTGGTACTGGTTTGGTAGTGGGTGTGTGGGCAATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCATTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATTGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAATTCTAA 822 48.3 MFLLRPEAPTPPFRPIPEETPSLLSRMTTNPLLHPHLEEETYLRNASNCGSGTGLVVGVWAMATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLHSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKF 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33555633 33559034 + CePI673135_11g019470.1 Cec11g1947 217159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1947 273 MobiDBLite consensus disorder prediction 1 21 - -
Cec11g1947 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 62 266 IPR036291 -
Cec11g1947 273 Pfam NAD dependent epimerase/dehydratase family 71 258 IPR001509 -
Cec11g1947 273 Coils Coil 113 133 - -
Cec11g1947 273 CDD FR_SDR_e 71 273 - -
Cec11g1947 273 Gene3D - 62 273 - -
Cec11g1947 273 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 70 267 IPR050425 GO:0016616(PANTHER)
Cec11g1947 273 FunFam Dihydroflavonol reductase 68 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1308 Cec-Chr10:27307948 Cec11g1947 Cec-Chr11:33555633 1.50E-54 dispersed
Cec10g1309 Cec-Chr10:27325638 Cec11g1947 Cec-Chr11:33555633 7.50E-54 dispersed
Cec02g1119 Cec-Chr2:24629572 Cec11g1947 Cec-Chr11:33555633 4.60E-43 transposed
Cec03g0031 Cec-Chr3:333744 Cec11g1947 Cec-Chr11:33555633 6.60E-50 transposed
Cec09g0328 Cec-Chr9:2728873 Cec11g1947 Cec-Chr11:33555633 5.80E-57 transposed
Cec10g0741 Cec-Chr10:10985064 Cec11g1947 Cec-Chr11:33555633 6.20E-48 transposed
Cec11g1947 Cec-Chr11:33555633 Cec08g1004 Cec-Chr8:21910820 2.00E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1947 - - - 0.0