Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1955 | ATGCGTTTTCGCTCAGTGATCACTCCATTATCAGGGATGATGGCGCTAGTTCAGCCACACACTTCAGGTTCTGCAATTTCGTCTTCCTCCGCCTCATTCTACAGAAGTTCTTTTCAGCAACTCCGTTCGCGGACCACGACCCTTGATCTTCGAAACAGCCACTCCATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGGGTTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAGTCCTCGCCAATAGTCCACTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAAGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAAGCTAGAAAAGATAGCTCATGGTATGGAGAAGGGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGAGCTTTAGTTCCAGAAATCTTAGATATTTTTGGAGCTTTTCATTTTACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGACCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGCTTCTTGGCCGATTTGTTACCAGTATACAACTAATCCTGAGGCATTTCTGGAAGAACGCAGTGCCCACTTTGTGACTTTCGAGAATGATTTGTTGGGTTGCAATGGAGCCGAGTGTAGGTGTACTGTCTCCCCTCCCTTCTCTCCCCATTCTCTGAATCAGTTCTCAAGATCTGCATCTGCGAATCTCCCACATTCATGTCTCCTACTCGATGATCTTCGCTACTCGATCTGCCAAATTCAATTCACTCCTCCACTTCTGCTTCAGGTAACTCTCTCTCCTTCAGCAATCTCCCTCTGTGATTGCCTTTGGGAGTGTTTGCTTCTTTCATCCGAAATGATGGCTGACATGGATGTGCTCGCTGACACATCTGAGGTTAACGAGAAGTGTGCCTTGGATATGAGTACCTACGAGAATTTGCCTAAAGGTTGCAATGCAGCATCTCTTCACTGTGCTACTCCCATTCCTAAGGATGATACCGACGGTTCTTACGTTTTCGTTAGCTCCACCGATGCTGCTACTTCCGATGATCACGTTGCTTCGGATCTTAATGGGCAAGCAGAGTGTTCTCAGAATGTTGATACGGAGATTATGGTTCGTAATCGGGAATTGAATACTGACGTCGGTAGGAAACCTGAATCAATTATCGTTTCCGATGCATTGGAGGATTCCCAATTCGAATTTTCTGAGCATGTGAAAGAGAATGACGCAATTCAGGATGAGATCAGAGTGGCGGATGTCCTTCAATCTTCCGACGCCAAGGTGGATGAAGCGGAACCTGGACTGGATTCTTCTCAGACGGTGGAAGAAACTCGAATCCTAGAGGACCAGACTATCAACGTATCTTTTGATGCAGAGACAAATTCTGGCGAAATCCATGGGGTACAGTCTGCTCAAGCAGTTGAAGACAATCAGATTCAGGAGGAAAATCAAAGAATTTCTACCTCTGGATCTTCTAACACCGATGCAAATCGTTGTGGAGAAATCGAGGTGGAGTCTTCCCAAATGGCGGAAGATATTAACAGTCATGAGGATAACGGAATTGTGAAAATCATGAAGTCTTTTGATACCGAAACAAATCATGTGATAAACATCGAGGCGGAGTCTTCTCCGAAGGCAGACGGCATCCAGATTCACAAAGAAAATGGAACGGTTGCAATCAAGTTTTCTGATTTTGAGTCAAACCCTGGGGAAGAAATTGAGGTGGAGTCTTCTCAGAAGGCAGACGACATTCAGAATCACGAGGAAAATGGCATAACGAAATCCTCTTCTGATACCGAGGCAAACCCTAGGTCAGAAATTGAGGTGGAGTCTTCACGGGAGGTTGAAGACATTGAGATTCAGGAGCAAGATGAAGTAGTGGATGCCATCAAATCTTCTGCTACAGTGGAAAAGCGTGGGCAAGAAGGTGAAGTAATCCCCGAGTATAATGACACAGTGGCTATCAATGAATTGTCTGATACCATACATTACAGCAGTAAAGAAACTGAGATGGAATCTTTCGAGAGAGAGGAAGGCATTCGAGAGTCAGAAAATGCAAATTTGGAGGCTGCTGACTGCCATTATGTTAATGGCAAAGAGAAGGTTGATGAGATGGTAAATAAAGCTGTGATAAGCGACCCTGTGGGAGGAATAGGAGAATCTCAAATTATAAGTATGGGTGCTGCTGAATCTGACCTAGATGATTCTGATGATACCATGGAAGACGTTAAGAGGGAATGTACATCAGGGGTTGCCTTGAATGAGGAGAACTCTAAGAAAACTCAATTAACAATTAGTCAGGATGGTGAACATTACCAGGTTGTTGGTGAGGAACAAGAAAATTTAAACAATGAAGTTTCTCTTTTAGGGCCATCAGAAGAAAACAAAGCGGACGTGGAGCAGCATTTGGCAGCAGCTCCTAGTCCACTGGTCAGTTCAGAAGACATAAATGGTTCTATCTCCATTAGCACGGAAGATGGCTTGCCAACTAGTATGGATCAAGATGTCCCCTTGGGAACTATTAATGACAAAGACACTGTAGCTAACAGGACCAACTTCCATGACCACACTGAATCCTCATCTGGCTCTGTAGATTGTGATGTCGCTACTGTTGAAACTCATCAATTATCTCCTGAGATGCTTATTAGTGATCCAATAGAGTTAAATGAGATTTCTGTGAATGATGAACAAGAGGTGAATCATGTGTTGGAACTAGAAGAGAATTCAGAAATGGCATCTCATCCTAAAATAGATGAATGTGTCAAGGTTGAAGTTTTGGAAGGTACGGTCTCTGGAAATGGAGATGAGGTGCCCACTGCATTCGACGAATCTAGAATTTCTTGTGGTGATGACTTTGTTGCTGGCAGTCAATTAATCGCCGGGGGCACTGAACCAGTGGAAAGCATTGACACAGTATCTGCTGTTGTGATAGGAAATACTTCAATTGAAATAAGGGAACTGGGCTCTACGAATTGTCCTAATGATCCAGTAGTGAGATCCGATCTTGATGTTGAGGATTGTAAAGTGTCTGAAATTGTGGCTTCTGTGGGTGATGTTGTCCGAGCGGATAAAGAAGTCAGGGCAAATCATGAGGTTGATTTTCTTGGTAACTCTAATTTTGAAACCAAGTGTGAGAATGGTCGCGTCGAAAAAGATCACCAAGGAACTTTCCATAGTAATGATTTTATGTCAATTGAATGTCAAGAGAGAGGTTCCACTGTTCCTGAAATTCCTAATGGTGTCAATAAATCTTCTGCAATTCAACTAAGTTCTGCTGTTGCAACAGACTCGGAATTGCATGATAATGGAAGTTGCTCAATTCCTATTGCTAATAAGAAATCAGGAGACGACATAAAGATTCCATCCTCCAAAGGAGGTGGTAGCAGAAATATATCTGGAGATGATTGCAGTGTGTCAAAAACTGACGTTCTCAAGGGTTCTATAGTAAACGATGAAGGGAATCTGAACTCAATGTCTGATGTTGTCTCTGAAACTGATGATAAGCCGGCAACAGAAGAAACTCAGGTCATTCATGAGGGTTGCCAGAATGAACCTTCACCTATTTCTCCAGAAGGTTCTGTTGACACTATAACGGGGCAAAATGTAGGGGCTGACGCAGGAACAAGGCCGTTTAACTTTTTGGTTAAGGTACCTAGATTCGATGACAAAAATATAAGAGAGCAGATTAAGTGTGCTCAGACAGAAGTTGATTGGAAGACAAAGGATCGAGATGCCATTCGGGTTCAAATACAGACAATGAGGGCTGCATGGAAAGTGTTGAGTGATAATCTTGAAGCAGCAGTGTCGGAAGGAAGAGCTGCAAGAGACTTGCTCAAGTCAAAAAGACTGGAGATAGACTCTGTTCAATCAGTGATAACAAAAGTGAAGAATGCCATGTCTGTTGAGGATATTGATGGCAGGATACGCAACATTGAACATATGATAGAGCATGAAACACTGCCATTAAAAGAAGAAAAACAATTAATTCGTGAAATCAAGCAATTGAAGCAGCTGCGGGAACAGCTTTCATCAACTATGGGTAAGCAGGATGAGCTTCAACAGGCATTGGACCAGAAAGACCAGATTGAAGAGCGCCTTAAGCTATTAAGAAAGGAGATGGATTTACTGAGAGACAATGTTGTGAAAGCTGAATCAGTTATAAAGGCTGCCAAGAAGAAATATAATGATGAAAGCATTAAGCTGGATGAATTGCAATCCCAGTTTAAAGCAGCAGATAAGATTCGCCAAGAAGCATATGCTAATTTACAGAGTATGAGGAAGCAATTATATGAGAAGAACAAATACTGCTGGAAGTATCGGGATGACGCAAAGGAAGCCAATGAAATAGCGTCAAGTCGAGATCTAGAGAGACTGCAACATTTTTGTGTTAATCAGGTGGAGCGCATGATGGAACTGTGGAACACAAATGCTGAGTTCAGGGAAGAATATATTAAGAGCAACATGAGGAGTACCCTAAGGCGACTAAAGACATTGGATGGCCGCTCCCTTGGCCCTAATGAAGAGCCGCATGTACTGAATCTTGTTGTTAAGGAGGGACCAGCGAGGGACAATTCTCTTTCAACGGTTTCAACAACGCAGGAATCTGAAAAACTGATACCCGCTGATGATGCGAGAGATAATGACAAACCAGGGACCAAAGTAGCTGAAACGAAGAATCAAATGACAAAAAGGAAGAAGCCTGAAACAGTTCTGGCTTTAGTGAATGACCCTAGGAATATCTCTAGCGAGAACGAGGTAGAAGAGCCACCACGACCGGAGGAGATTAAGCGAACAAGAGAGGAAGAGGAGCTGGCGGCAAAAGCAGAAGAGTTGAGAAAGGAAGAGGAAGCAAGGAAGTTGAAGGAGCAACGGAAGTTGGAAGAGAAGGCCAAAGCCAAAGAGGCGTTGGAGAGGAAAAAAAGAAATGCTGAGAAAGCCCAGGCCAGGGCAGTAATCAAAGCACGAAAAGAGGCAGAAGAGAGGGAGAAGCTAAGGGAGAAGAGAGCAAAAAAGAAGGAAAGGAAGATGGCAGCTGAGACGGAAGCTGGAAATGGTTGGCATGAAAGGGAAGCTGCTTTAGTCACCGAAAAGCCTTCAGAAGCTCCGAAGGAGGAGTCTGAAAACACAGGTAAACAGGGGATGGCACTGGCAGCGAAGAGGCCTCTAAAAGCGTCGCAGTACACAAAGCAGAGCAAGACAAAGTCAATTCCTCCGCCACTTCGAAATCGTGGTAAGAGGAGGATGCAACCATGGATGTGGGTTCTTCTGACAACCGTGGTTGTTTTTGCGCTGTTCTTCGTTGGACAACAACGGCTGCTCTACTAG | 5769 | 44.05 | MRFRSVITPLSGMMALVQPHTSGSAISSSSASFYRSSFQQLRSRTTTLDLRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKVLANSPLGESLQRQLEKKKKAAVANSSKFKALAEEARKDSSWYGEGRPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTASWPICYQYTTNPEAFLEERSAHFVTFENDLLGCNGAECRCTVSPPFSPHSLNQFSRSASANLPHSCLLLDDLRYSICQIQFTPPLLLQVTLSPSAISLCDCLWECLLLSSEMMADMDVLADTSEVNEKCALDMSTYENLPKGCNAASLHCATPIPKDDTDGSYVFVSSTDAATSDDHVASDLNGQAECSQNVDTEIMVRNRELNTDVGRKPESIIVSDALEDSQFEFSEHVKENDAIQDEIRVADVLQSSDAKVDEAEPGLDSSQTVEETRILEDQTINVSFDAETNSGEIHGVQSAQAVEDNQIQEENQRISTSGSSNTDANRCGEIEVESSQMAEDINSHEDNGIVKIMKSFDTETNHVINIEAESSPKADGIQIHKENGTVAIKFSDFESNPGEEIEVESSQKADDIQNHEENGITKSSSDTEANPRSEIEVESSREVEDIEIQEQDEVVDAIKSSATVEKRGQEGEVIPEYNDTVAINELSDTIHYSSKETEMESFEREEGIRESENANLEAADCHYVNGKEKVDEMVNKAVISDPVGGIGESQIISMGAAESDLDDSDDTMEDVKRECTSGVALNEENSKKTQLTISQDGEHYQVVGEEQENLNNEVSLLGPSEENKADVEQHLAAAPSPLVSSEDINGSISISTEDGLPTSMDQDVPLGTINDKDTVANRTNFHDHTESSSGSVDCDVATVETHQLSPEMLISDPIELNEISVNDEQEVNHVLELEENSEMASHPKIDECVKVEVLEGTVSGNGDEVPTAFDESRISCGDDFVAGSQLIAGGTEPVESIDTVSAVVIGNTSIEIRELGSTNCPNDPVVRSDLDVEDCKVSEIVASVGDVVRADKEVRANHEVDFLGNSNFETKCENGRVEKDHQGTFHSNDFMSIECQERGSTVPEIPNGVNKSSAIQLSSAVATDSELHDNGSCSIPIANKKSGDDIKIPSSKGGGSRNISGDDCSVSKTDVLKGSIVNDEGNLNSMSDVVSETDDKPATEETQVIHEGCQNEPSPISPEGSVDTITGQNVGADAGTRPFNFLVKVPRFDDKNIREQIKCAQTEVDWKTKDRDAIRVQIQTMRAAWKVLSDNLEAAVSEGRAARDLLKSKRLEIDSVQSVITKVKNAMSVEDIDGRIRNIEHMIEHETLPLKEEKQLIREIKQLKQLREQLSSTMGKQDELQQALDQKDQIEERLKLLRKEMDLLRDNVVKAESVIKAAKKKYNDESIKLDELQSQFKAADKIRQEAYANLQSMRKQLYEKNKYCWKYRDDAKEANEIASSRDLERLQHFCVNQVERMMELWNTNAEFREEYIKSNMRSTLRRLKTLDGRSLGPNEEPHVLNLVVKEGPARDNSLSTVSTTQESEKLIPADDARDNDKPGTKVAETKNQMTKRKKPETVLALVNDPRNISSENEVEEPPRPEEIKRTREEEELAAKAEELRKEEEARKLKEQRKLEEKAKAKEALERKKRNAEKAQARAVIKARKEAEEREKLREKRAKKKERKMAAETEAGNGWHEREAALVTEKPSEAPKEESENTGKQGMALAAKRPLKASQYTKQSKTKSIPPPLRNRGKRRMQPWMWVLLTTVVVFALFFVGQQRLLY | 1922 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33598804 | 33619084 | + | CePI673135_11g019550.1 | Cec11g1955 | 217167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1955 | 1922 | Gene3D | Chlorophyll a/b binding protein domain | 133 | 336 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 1246 | 1282 | - | - | |
Cec11g1955 | 1922 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 133 | 334 | - | - | |
Cec11g1955 | 1922 | Pfam | Chlorophyll A-B binding protein | 143 | 318 | IPR022796 | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 1669 | 1892 | - | - | |
Cec11g1955 | 1922 | PANTHER | RNA-BINDING PROTEIN YLMH-RELATED | 1224 | 1914 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 716 | 763 | - | - | |
Cec11g1955 | 1922 | Coils | Coil | 874 | 894 | - | - | |
Cec11g1955 | 1922 | Coils | Coil | 1745 | 1829 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 721 | 737 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 749 | 763 | - | - | |
Cec11g1955 | 1922 | SUPERFAMILY | Chlorophyll a-b binding protein | 125 | 326 | - | - | |
Cec11g1955 | 1922 | Coils | Coil | 1473 | 1555 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 1671 | 1685 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 1729 | 1855 | - | - | |
Cec11g1955 | 1922 | MobiDBLite | consensus disorder prediction | 1686 | 1719 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0207 | Cec-Chr6:2144383 | Cec11g1955 | Cec-Chr11:33598804 | 4.10E-08 | dispersed | |
Cec10g0627 | Cec-Chr10:8406037 | Cec11g1955 | Cec-Chr11:33598804 | 3.40E-44 | dispersed | |
Cec11g1417 | Cec-Chr11:28360103 | Cec11g1955 | Cec-Chr11:33598804 | 2.50E-23 | dispersed | |
Cec11g1847 | Cec-Chr11:32667538 | Cec11g1955 | Cec-Chr11:33598804 | 3.00E-25 | dispersed | |
Cec11g1955 | Cec-Chr11:33598804 | Cec02g1928 | Cec-Chr2:37141034 | 6.40E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1955 | - | - | - | 0.0 |