Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1955 ATGCGTTTTCGCTCAGTGATCACTCCATTATCAGGGATGATGGCGCTAGTTCAGCCACACACTTCAGGTTCTGCAATTTCGTCTTCCTCCGCCTCATTCTACAGAAGTTCTTTTCAGCAACTCCGTTCGCGGACCACGACCCTTGATCTTCGAAACAGCCACTCCATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGGGTTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAGTCCTCGCCAATAGTCCACTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAAGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAAGCTAGAAAAGATAGCTCATGGTATGGAGAAGGGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGAGCTTTAGTTCCAGAAATCTTAGATATTTTTGGAGCTTTTCATTTTACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGACCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGCTTCTTGGCCGATTTGTTACCAGTATACAACTAATCCTGAGGCATTTCTGGAAGAACGCAGTGCCCACTTTGTGACTTTCGAGAATGATTTGTTGGGTTGCAATGGAGCCGAGTGTAGGTGTACTGTCTCCCCTCCCTTCTCTCCCCATTCTCTGAATCAGTTCTCAAGATCTGCATCTGCGAATCTCCCACATTCATGTCTCCTACTCGATGATCTTCGCTACTCGATCTGCCAAATTCAATTCACTCCTCCACTTCTGCTTCAGGTAACTCTCTCTCCTTCAGCAATCTCCCTCTGTGATTGCCTTTGGGAGTGTTTGCTTCTTTCATCCGAAATGATGGCTGACATGGATGTGCTCGCTGACACATCTGAGGTTAACGAGAAGTGTGCCTTGGATATGAGTACCTACGAGAATTTGCCTAAAGGTTGCAATGCAGCATCTCTTCACTGTGCTACTCCCATTCCTAAGGATGATACCGACGGTTCTTACGTTTTCGTTAGCTCCACCGATGCTGCTACTTCCGATGATCACGTTGCTTCGGATCTTAATGGGCAAGCAGAGTGTTCTCAGAATGTTGATACGGAGATTATGGTTCGTAATCGGGAATTGAATACTGACGTCGGTAGGAAACCTGAATCAATTATCGTTTCCGATGCATTGGAGGATTCCCAATTCGAATTTTCTGAGCATGTGAAAGAGAATGACGCAATTCAGGATGAGATCAGAGTGGCGGATGTCCTTCAATCTTCCGACGCCAAGGTGGATGAAGCGGAACCTGGACTGGATTCTTCTCAGACGGTGGAAGAAACTCGAATCCTAGAGGACCAGACTATCAACGTATCTTTTGATGCAGAGACAAATTCTGGCGAAATCCATGGGGTACAGTCTGCTCAAGCAGTTGAAGACAATCAGATTCAGGAGGAAAATCAAAGAATTTCTACCTCTGGATCTTCTAACACCGATGCAAATCGTTGTGGAGAAATCGAGGTGGAGTCTTCCCAAATGGCGGAAGATATTAACAGTCATGAGGATAACGGAATTGTGAAAATCATGAAGTCTTTTGATACCGAAACAAATCATGTGATAAACATCGAGGCGGAGTCTTCTCCGAAGGCAGACGGCATCCAGATTCACAAAGAAAATGGAACGGTTGCAATCAAGTTTTCTGATTTTGAGTCAAACCCTGGGGAAGAAATTGAGGTGGAGTCTTCTCAGAAGGCAGACGACATTCAGAATCACGAGGAAAATGGCATAACGAAATCCTCTTCTGATACCGAGGCAAACCCTAGGTCAGAAATTGAGGTGGAGTCTTCACGGGAGGTTGAAGACATTGAGATTCAGGAGCAAGATGAAGTAGTGGATGCCATCAAATCTTCTGCTACAGTGGAAAAGCGTGGGCAAGAAGGTGAAGTAATCCCCGAGTATAATGACACAGTGGCTATCAATGAATTGTCTGATACCATACATTACAGCAGTAAAGAAACTGAGATGGAATCTTTCGAGAGAGAGGAAGGCATTCGAGAGTCAGAAAATGCAAATTTGGAGGCTGCTGACTGCCATTATGTTAATGGCAAAGAGAAGGTTGATGAGATGGTAAATAAAGCTGTGATAAGCGACCCTGTGGGAGGAATAGGAGAATCTCAAATTATAAGTATGGGTGCTGCTGAATCTGACCTAGATGATTCTGATGATACCATGGAAGACGTTAAGAGGGAATGTACATCAGGGGTTGCCTTGAATGAGGAGAACTCTAAGAAAACTCAATTAACAATTAGTCAGGATGGTGAACATTACCAGGTTGTTGGTGAGGAACAAGAAAATTTAAACAATGAAGTTTCTCTTTTAGGGCCATCAGAAGAAAACAAAGCGGACGTGGAGCAGCATTTGGCAGCAGCTCCTAGTCCACTGGTCAGTTCAGAAGACATAAATGGTTCTATCTCCATTAGCACGGAAGATGGCTTGCCAACTAGTATGGATCAAGATGTCCCCTTGGGAACTATTAATGACAAAGACACTGTAGCTAACAGGACCAACTTCCATGACCACACTGAATCCTCATCTGGCTCTGTAGATTGTGATGTCGCTACTGTTGAAACTCATCAATTATCTCCTGAGATGCTTATTAGTGATCCAATAGAGTTAAATGAGATTTCTGTGAATGATGAACAAGAGGTGAATCATGTGTTGGAACTAGAAGAGAATTCAGAAATGGCATCTCATCCTAAAATAGATGAATGTGTCAAGGTTGAAGTTTTGGAAGGTACGGTCTCTGGAAATGGAGATGAGGTGCCCACTGCATTCGACGAATCTAGAATTTCTTGTGGTGATGACTTTGTTGCTGGCAGTCAATTAATCGCCGGGGGCACTGAACCAGTGGAAAGCATTGACACAGTATCTGCTGTTGTGATAGGAAATACTTCAATTGAAATAAGGGAACTGGGCTCTACGAATTGTCCTAATGATCCAGTAGTGAGATCCGATCTTGATGTTGAGGATTGTAAAGTGTCTGAAATTGTGGCTTCTGTGGGTGATGTTGTCCGAGCGGATAAAGAAGTCAGGGCAAATCATGAGGTTGATTTTCTTGGTAACTCTAATTTTGAAACCAAGTGTGAGAATGGTCGCGTCGAAAAAGATCACCAAGGAACTTTCCATAGTAATGATTTTATGTCAATTGAATGTCAAGAGAGAGGTTCCACTGTTCCTGAAATTCCTAATGGTGTCAATAAATCTTCTGCAATTCAACTAAGTTCTGCTGTTGCAACAGACTCGGAATTGCATGATAATGGAAGTTGCTCAATTCCTATTGCTAATAAGAAATCAGGAGACGACATAAAGATTCCATCCTCCAAAGGAGGTGGTAGCAGAAATATATCTGGAGATGATTGCAGTGTGTCAAAAACTGACGTTCTCAAGGGTTCTATAGTAAACGATGAAGGGAATCTGAACTCAATGTCTGATGTTGTCTCTGAAACTGATGATAAGCCGGCAACAGAAGAAACTCAGGTCATTCATGAGGGTTGCCAGAATGAACCTTCACCTATTTCTCCAGAAGGTTCTGTTGACACTATAACGGGGCAAAATGTAGGGGCTGACGCAGGAACAAGGCCGTTTAACTTTTTGGTTAAGGTACCTAGATTCGATGACAAAAATATAAGAGAGCAGATTAAGTGTGCTCAGACAGAAGTTGATTGGAAGACAAAGGATCGAGATGCCATTCGGGTTCAAATACAGACAATGAGGGCTGCATGGAAAGTGTTGAGTGATAATCTTGAAGCAGCAGTGTCGGAAGGAAGAGCTGCAAGAGACTTGCTCAAGTCAAAAAGACTGGAGATAGACTCTGTTCAATCAGTGATAACAAAAGTGAAGAATGCCATGTCTGTTGAGGATATTGATGGCAGGATACGCAACATTGAACATATGATAGAGCATGAAACACTGCCATTAAAAGAAGAAAAACAATTAATTCGTGAAATCAAGCAATTGAAGCAGCTGCGGGAACAGCTTTCATCAACTATGGGTAAGCAGGATGAGCTTCAACAGGCATTGGACCAGAAAGACCAGATTGAAGAGCGCCTTAAGCTATTAAGAAAGGAGATGGATTTACTGAGAGACAATGTTGTGAAAGCTGAATCAGTTATAAAGGCTGCCAAGAAGAAATATAATGATGAAAGCATTAAGCTGGATGAATTGCAATCCCAGTTTAAAGCAGCAGATAAGATTCGCCAAGAAGCATATGCTAATTTACAGAGTATGAGGAAGCAATTATATGAGAAGAACAAATACTGCTGGAAGTATCGGGATGACGCAAAGGAAGCCAATGAAATAGCGTCAAGTCGAGATCTAGAGAGACTGCAACATTTTTGTGTTAATCAGGTGGAGCGCATGATGGAACTGTGGAACACAAATGCTGAGTTCAGGGAAGAATATATTAAGAGCAACATGAGGAGTACCCTAAGGCGACTAAAGACATTGGATGGCCGCTCCCTTGGCCCTAATGAAGAGCCGCATGTACTGAATCTTGTTGTTAAGGAGGGACCAGCGAGGGACAATTCTCTTTCAACGGTTTCAACAACGCAGGAATCTGAAAAACTGATACCCGCTGATGATGCGAGAGATAATGACAAACCAGGGACCAAAGTAGCTGAAACGAAGAATCAAATGACAAAAAGGAAGAAGCCTGAAACAGTTCTGGCTTTAGTGAATGACCCTAGGAATATCTCTAGCGAGAACGAGGTAGAAGAGCCACCACGACCGGAGGAGATTAAGCGAACAAGAGAGGAAGAGGAGCTGGCGGCAAAAGCAGAAGAGTTGAGAAAGGAAGAGGAAGCAAGGAAGTTGAAGGAGCAACGGAAGTTGGAAGAGAAGGCCAAAGCCAAAGAGGCGTTGGAGAGGAAAAAAAGAAATGCTGAGAAAGCCCAGGCCAGGGCAGTAATCAAAGCACGAAAAGAGGCAGAAGAGAGGGAGAAGCTAAGGGAGAAGAGAGCAAAAAAGAAGGAAAGGAAGATGGCAGCTGAGACGGAAGCTGGAAATGGTTGGCATGAAAGGGAAGCTGCTTTAGTCACCGAAAAGCCTTCAGAAGCTCCGAAGGAGGAGTCTGAAAACACAGGTAAACAGGGGATGGCACTGGCAGCGAAGAGGCCTCTAAAAGCGTCGCAGTACACAAAGCAGAGCAAGACAAAGTCAATTCCTCCGCCACTTCGAAATCGTGGTAAGAGGAGGATGCAACCATGGATGTGGGTTCTTCTGACAACCGTGGTTGTTTTTGCGCTGTTCTTCGTTGGACAACAACGGCTGCTCTACTAG 5769 44.05 MRFRSVITPLSGMMALVQPHTSGSAISSSSASFYRSSFQQLRSRTTTLDLRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKVLANSPLGESLQRQLEKKKKAAVANSSKFKALAEEARKDSSWYGEGRPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTASWPICYQYTTNPEAFLEERSAHFVTFENDLLGCNGAECRCTVSPPFSPHSLNQFSRSASANLPHSCLLLDDLRYSICQIQFTPPLLLQVTLSPSAISLCDCLWECLLLSSEMMADMDVLADTSEVNEKCALDMSTYENLPKGCNAASLHCATPIPKDDTDGSYVFVSSTDAATSDDHVASDLNGQAECSQNVDTEIMVRNRELNTDVGRKPESIIVSDALEDSQFEFSEHVKENDAIQDEIRVADVLQSSDAKVDEAEPGLDSSQTVEETRILEDQTINVSFDAETNSGEIHGVQSAQAVEDNQIQEENQRISTSGSSNTDANRCGEIEVESSQMAEDINSHEDNGIVKIMKSFDTETNHVINIEAESSPKADGIQIHKENGTVAIKFSDFESNPGEEIEVESSQKADDIQNHEENGITKSSSDTEANPRSEIEVESSREVEDIEIQEQDEVVDAIKSSATVEKRGQEGEVIPEYNDTVAINELSDTIHYSSKETEMESFEREEGIRESENANLEAADCHYVNGKEKVDEMVNKAVISDPVGGIGESQIISMGAAESDLDDSDDTMEDVKRECTSGVALNEENSKKTQLTISQDGEHYQVVGEEQENLNNEVSLLGPSEENKADVEQHLAAAPSPLVSSEDINGSISISTEDGLPTSMDQDVPLGTINDKDTVANRTNFHDHTESSSGSVDCDVATVETHQLSPEMLISDPIELNEISVNDEQEVNHVLELEENSEMASHPKIDECVKVEVLEGTVSGNGDEVPTAFDESRISCGDDFVAGSQLIAGGTEPVESIDTVSAVVIGNTSIEIRELGSTNCPNDPVVRSDLDVEDCKVSEIVASVGDVVRADKEVRANHEVDFLGNSNFETKCENGRVEKDHQGTFHSNDFMSIECQERGSTVPEIPNGVNKSSAIQLSSAVATDSELHDNGSCSIPIANKKSGDDIKIPSSKGGGSRNISGDDCSVSKTDVLKGSIVNDEGNLNSMSDVVSETDDKPATEETQVIHEGCQNEPSPISPEGSVDTITGQNVGADAGTRPFNFLVKVPRFDDKNIREQIKCAQTEVDWKTKDRDAIRVQIQTMRAAWKVLSDNLEAAVSEGRAARDLLKSKRLEIDSVQSVITKVKNAMSVEDIDGRIRNIEHMIEHETLPLKEEKQLIREIKQLKQLREQLSSTMGKQDELQQALDQKDQIEERLKLLRKEMDLLRDNVVKAESVIKAAKKKYNDESIKLDELQSQFKAADKIRQEAYANLQSMRKQLYEKNKYCWKYRDDAKEANEIASSRDLERLQHFCVNQVERMMELWNTNAEFREEYIKSNMRSTLRRLKTLDGRSLGPNEEPHVLNLVVKEGPARDNSLSTVSTTQESEKLIPADDARDNDKPGTKVAETKNQMTKRKKPETVLALVNDPRNISSENEVEEPPRPEEIKRTREEEELAAKAEELRKEEEARKLKEQRKLEEKAKAKEALERKKRNAEKAQARAVIKARKEAEEREKLREKRAKKKERKMAAETEAGNGWHEREAALVTEKPSEAPKEESENTGKQGMALAAKRPLKASQYTKQSKTKSIPPPLRNRGKRRMQPWMWVLLTTVVVFALFFVGQQRLLY 1922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33598804 33619084 + CePI673135_11g019550.1 Cec11g1955 217167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1955 1922 Gene3D Chlorophyll a/b binding protein domain 133 336 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 1246 1282 - -
Cec11g1955 1922 FunFam Chlorophyll a-b binding protein, chloroplastic 133 334 - -
Cec11g1955 1922 Pfam Chlorophyll A-B binding protein 143 318 IPR022796 -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 1669 1892 - -
Cec11g1955 1922 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 1224 1914 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 716 763 - -
Cec11g1955 1922 Coils Coil 874 894 - -
Cec11g1955 1922 Coils Coil 1745 1829 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 721 737 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 749 763 - -
Cec11g1955 1922 SUPERFAMILY Chlorophyll a-b binding protein 125 326 - -
Cec11g1955 1922 Coils Coil 1473 1555 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 1671 1685 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 1729 1855 - -
Cec11g1955 1922 MobiDBLite consensus disorder prediction 1686 1719 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0207 Cec-Chr6:2144383 Cec11g1955 Cec-Chr11:33598804 4.10E-08 dispersed
Cec10g0627 Cec-Chr10:8406037 Cec11g1955 Cec-Chr11:33598804 3.40E-44 dispersed
Cec11g1417 Cec-Chr11:28360103 Cec11g1955 Cec-Chr11:33598804 2.50E-23 dispersed
Cec11g1847 Cec-Chr11:32667538 Cec11g1955 Cec-Chr11:33598804 3.00E-25 dispersed
Cec11g1955 Cec-Chr11:33598804 Cec02g1928 Cec-Chr2:37141034 6.40E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1955 - - - 0.0