Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1964 ATGATCTCTGAACCGGTTCTAGGAGAAGCTTACCAAGTATTAAGCGATCCAGCTCAAAGACAAGCTTATGATGCTCATGGGAAGTCTGGAATCTCAACTGATGCGATTATTGATCCTGCAGCAATTTTTGCAATGCTTTTTGGAAGTGAACTTTTTGAGGAATACATAGGTGAGCTTGCCATGGCATCGATGGCTTCTCTGGACATTTTCACTGAAGGGGAGCAATTTGATGCTAAACGGTTGCAAGAGAAGATGAGGATTGTCCAAAAGGAAAGAGAAGAAAAACTTTCAGAAATTTTGAAAGGTCGTCTCAACCAGTATGTTCAAGGGAACAAAGATGATTTTATTAATCATGCTGAAGCTGAAGTAGCAAGACTCTCCAACGCAGCCTATGGAGTTGACATGTTAAACACAATTGGTTATATATATGCCAGACAGGCTGCTAAAGAGCTTGGGAAGAAGGCAATTTATTTGGGCGTGCCATTTGTTGCTGAGTGGTTCAGAAACAAAGGGCACTTCATAAAATCCCAGGTCACAGCAGCCACAGGTGCTATTGCATTGATTCAACTGCAGGAGGACATGAAAAAGCAACTTAGTGCTGAAGGAAATTATACTGAAGAAGAGCTTGAAGAATACGTGCAATCTCATAAGAAATTGATGATTGATTCCCTCTGGAAATTGAACGTGGCTGACATTGAGGCCACTCTTTCCCGTGTCTGTCAACAGGTTCTTCAAGACAACAACGTCAAGAAGGAGGAGCTCCGTGCAAGGGCGAAGGGATTGAAAACTCTTGGTAAAATTTTCCAGAGGGTTAAGTCAACCAATGGGAATGAGAGTGAACCAGTAGTAAAAGGTTCAGTAGACAAACTGAATGGAAGTGAATCAAGCCATGATGCTTCCCCAATTTCAACACTGAAATCTTCCGGCTATGAAGAAACATCTTTTGCAACACAGAGTCCCTATGTGGAGGCTCCCAATTTTGCAGGTGCACACTTTAATAACTATTTCCCCAGGCCAACACCGCCTCCAGATATGGTTGTATGTGTGGATAATCTTGCTAGAAAGCAGCTGCCATTCCTTTACTCGGGGGATGTGTTTGTTGTTGATATGTATTTAACAGACAGACTAATGGCTGTAGTCGGAACTTCTCATCATTCTGGCTGGCTGTGTTCACCGTTGGCCGCTTGGTGGTGA 1194 42.96 MISEPVLGEAYQVLSDPAQRQAYDAHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGELAMASMASLDIFTEGEQFDAKRLQEKMRIVQKEREEKLSEILKGRLNQYVQGNKDDFINHAEAEVARLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFVAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYVQSHKKLMIDSLWKLNVADIEATLSRVCQQVLQDNNVKKEELRARAKGLKTLGKIFQRVKSTNGNESEPVVKGSVDKLNGSESSHDASPISTLKSSGYEETSFATQSPYVEAPNFAGAHFNNYFPRPTPPPDMVVCVDNLARKQLPFLYSGDVFVVDMYLTDRLMAVVGTSHHSGWLCSPLAAWW 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33687056 33702832 - CePI673135_11g019640.1 Cec11g1964 217176

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1964 397 Coils Coil 78 98 - -
Cec11g1964 397 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 295 IPR052423 -
Cec11g1964 397 Pfam X-domain of DnaJ-containing 89 280 IPR026894 -
Cec11g1964 397 SUPERFAMILY Chaperone J-domain 7 55 IPR036869 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1964 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0666 Cec-Chr8:18363502 Cec11g1964 Cec-Chr11:33687056 7.30E-75 dispersed
Cec11g0435 Cec-Chr11:4545981 Cec11g1964 Cec-Chr11:33687056 1.80E-79 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g3 Blo01g01664 . . Bda03g00342 Bpe02g00277 Bpe04g00302 Bma04g00311 Bma01g02435 . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1483 . Lsi04g02441 Csa04g02758 . . . . . Bda01g01580 Bpe02g01770 . . . . . . . . . . . . . . . . . . . Cla11g01868 Cam11g1938 Cec11g1964 . Clacu11g2104 Cmu11g1905 Cre11g2313 . . Chy07g00444 .