Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00010 ATGACTTCATCTTCTTCAGAACACCCACAAATTCCCCTCCCTCTGAAACCCATCCCCGGCAGCTATGGCTTCCCCATCTTTGGACCCATCATAGATCGCTACCATTACTTCTACATCCAAGGCAGAGAAACCTTCTTCCGATCTCGAATGGCCAAGTACAATTCCACTGTGTTCCGTACCAACATGCCTCCAGGTCCCTTCATCTCTTCCAATTCCAAAGTAATCGTCCTTCTCGACGCCCTCAGTTTTCCGATCCTCTTCGACACCACTAAAGTAGAGAAACGCAACGTTCTCGATGGAACTTACATGCCCTCCCTTGCCTTCACCGGAGGCATTCGTACTTGTGCTTTCTTGGACCCATCTGAAACAGAGCACTCTGTTCTCAAACGCCATTTCCTCAAATTTCTTGCCTCTCGTCACCACCAATTCATTCCTCTCTTTCGAACCTCCATCTCCGAGATGTTTGATAATCTTGAAAAGGAATTAGAAAACAATAACGTCGCCAATTTTAATCCTCTCAGTGATTACGCATCCTTTGATTTCATTTTCCGATTGCTTTCCGATCGCAGCCCCGATAAGAATTTCAGCTCCGAGGGACCGGGTTTAGTCGACCGATGGCTTACTATGCAGCTCGCTCCATTAGCGACTCTTGGTTTGCCCAAAATTTTCAGCTGCTTTGAAGATCTCATCATCCATACTTTCCGTTTACCGTTCGCACTCGTTAAAAGCGCTTACAGGAAGCTCTACGAATCGTTTTACGAGTCGTCAGGTTCATTTCTAGACGAAGCCGAGAAACAGGGAATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCTGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTGCCGATTCTGCTGAACTGGGTCGGATCTGCCGGCGAGGAGCTTCATCGGAAACTAGTCGGCGAAATCAGAGCCGCCGTGAAGATAGACGGGGGAATAACATTCGGGGCTTTAGAGAAGATGAGTCTGCTGAAATCCGTGGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCGTACCAATACGCAAAGGCGAAACAAGACATTGTGATAGAGAGCCATGATTCTGCTTTCAAGATCAAGAAAGGGGAAATGATTTTTGGGTATCAGCCGATCGCGACGAAAGATCCGAAGGTGTTTGAGAATGCGGAGGAGTTTGTGGGCGATAGGTTCGTGGGCGAGAAAGGGGAGAAGCTTTTGAAGTATGTTTATTGGTCAAACGGTCGGGAGACGGAGGAGCCGAAGGCGGAGAACAAGCAGTGTCCGGCAAGGGATCTGGTGGTGCTGATGTGCAGAGTAGTTTTGGTGGAACTTTTCCTCCGTTATGAGTCGTTCGCCGTCGAGGGAACCCGGTCGTCGTTGGGTTGGTCTGTTAAGGTTAAATCGTTGACTAAAGCCTAA 1437 48.23 MTSSSSEHPQIPLPLKPIPGSYGFPIFGPIIDRYHYFYIQGRETFFRSRMAKYNSTVFRTNMPPGPFISSNSKVIVLLDALSFPILFDTTKVEKRNVLDGTYMPSLAFTGGIRTCAFLDPSETEHSVLKRHFLKFLASRHHQFIPLFRTSISEMFDNLEKELENNNVANFNPLSDYASFDFIFRLLSDRSPDKNFSSEGPGLVDRWLTMQLAPLATLGLPKIFSCFEDLIIHTFRLPFALVKSAYRKLYESFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPILLNWVGSAGEELHRKLVGEIRAAVKIDGGITFGALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFKIKKGEMIFGYQPIATKDPKVFENAEEFVGDRFVGEKGEKLLKYVYWSNGRETEEPKAENKQCPARDLVVLMCRVVLVELFLRYESFAVEGTRSSLGWSVKVKSLTKA* 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81273 82801 - Chy1G000100.1 Chy01g00010 217191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00010 478 PANTHER CYTOCHROME P450 26 13 459 - -
Chy01g00010 478 PANTHER HYDROPEROXIDE LYASE 13 459 - -
Chy01g00010 478 SUPERFAMILY Cytochrome P450 12 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 Gene3D Cytochrome P450 13 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 Pfam Cytochrome P450 306 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 PRINTS E-class P450 group IV signature 433 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00010 478 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00010 Chy-Chr1:81273 Chy03g01495 Chy-Chr3:17343298 0 dispersed
Chy01g00011 Chy-Chr1:88100 Chy01g00010 Chy-Chr1:81273 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00010 K01723 - csv:101211574 946.421