Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00052 ATGGGATTACCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGATCCCAATATCTTCTTCTCACAGAAACAGAGAAGATATGGTGAAATTTTTAAGACCAATATTTTGGGGTGTCCTTGTGTTATGTTGGCAAGCGCAGCCGCAGCACGGTTTGTTTTGGTCACAAACGCCCATTTATTCCGACCGACTTACCCCAAAAGTAAAGAGACGATGATCGGACCGGCGGCGCTTTTCTTTCACCAAGGAAACTACCATTCTAACCTCAGGAAGCTTGTTCTTAATTCTCTGTCTCTTGAACGTCTCAGAACTCTTGTTCCTTGTATTGAAGCCGCCGCCATGTCCGCCACCGATTCTTGGGCCGCCGCCGACCATGTCATCAATACCTTCCTTGAAATGAAAAAGTATTCATTTGAGGTGGGAATTATAGCAGTGTTTGGAAAGCTCGAAGATGAGTACAAAGAGAAGCTAAAACAAAAGTATTGCATATTAGACAAAGGCTACAACTGTTTTCCCACCAGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTTAGGGAGATTCTGGGAGAGATAATAATGGAAAGAAGAGAAAAAAGAGTAACAGAGAGAGATTTAGTTGGTCATCTTTTGAACTTCAGAGATGAAAATGGTGAAAGCTTAAGTGAAGATCAAATCGCCGATAATATCATCGGAGTTCTCTTCGCCGCCCAAGACACCACCGCTACTGTCCTCACTTGGATCCTTAAATATCTTCACGATAACTTCAAACTTTTCGAGGCTGTCAAGGTAGAGCAGATGGAAATTTATAGAAGAAATGGAGAAGGAAAGATGCCTCTGTCTTGGAGTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCCTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATATAAAGGGTACCTTATCCCAAAGGGCTGGAAGGTGATGCCTTTATTCAGGAATATTCATCACAACCATGAGTACTTCCCTGACCCTCATATATTTGATCCCTCTAGATTTGAAGTGGCTCCAAGGGCCAATACATTCATGCCATTTGGGAATGGAGTACATTCTTGCCCTGGAAATGAACTTGCCAAGCTGGAGATCCTCATATTGCTCCATCACCTCATTACCAAATTCAGGTGGGAAGTAGAGGGATCACAAAGTGGGGTTGAATATGGGCCATTCCCAATGCCTGTCCAAGGCCTACCCGCCAGATTTTTCAAACAAACAACAACCAACCAATACCCTTTCCTTTCATAA 1320 42.8 MGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVLNSLSLERLRTLVPCIEAAAMSATDSWAAADHVINTFLEMKKYSFEVGIIAVFGKLEDEYKEKLKQKYCILDKGYNCFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDLVGHLLNFRDENGESLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNFKLFEAVKVEQMEIYRRNGEGKMPLSWSQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRANTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVEGSQSGVEYGPFPMPVQGLPARFFKQTTTNQYPFLS* 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 381119 383584 - Chy1G000520.1 Chy01g00052 217233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00052 439 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 Gene3D Cytochrome P450 1 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 428 - -
Chy01g00052 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Chy01g00052 439 PANTHER CYTOCHROME P450 26 1 428 - -
Chy01g00052 439 Pfam Cytochrome P450 3 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g00052 439 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00052 Chy-Chr1:381119 Chy07g01098 Chy-Chr7:15945213 0 dispersed
Chy01g00052 Chy-Chr1:381119 Chy07g00130 Chy-Chr7:1110303 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00052 K09843 - csv:101219389 870.152