Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy01g00053 | ATGGCTTCCACAACCAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCATCAAGAAGTCGGCCACAAGAGTCTCTTACAAAGCGATGCTCTGTATCAGTACATTCTGGAAACGAGCGTTTATCCAAGGGAGCCTGAATCGATGAAGGAATTAAGAGATTTAACTGCGAAACATCCATGGAATATAATGACGACATCGGCTGATGAAGGACAGTTTTTAAACATGTTGTTGAAGCTAATCAATGCGAAGAAGACTATGGAGATTGGAGTTTATACTGGGTATTCGCTTCTGGCTACGGCCCTAGCTCTTCCTGAAGATGGAACGATTCTGGCTATGGATATTAATAGAGAAAATTATGAGTTGGGTTTGCCGGTAATTGAAAAAGCCGGCGTTGCTCATAAAATCGAGTTCAAAGAAGGTCCTGCTCTCCCAGTTCTTGACGACATGGTTGCTGATAAGAAGAATCATGGAAGTTATGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATCGATCTAGTTAAAGTTGGTGGAGTGATCGGATATGACAATACACTGTGGAACGGATCAGTGGTTGCTCCACCTGATGCACCCATGCGCAAGTATGTTAGGTATTACAGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCTGCTGACCCTAGGATTGAGATTTGTATGCTTCCCGTTGGTGATGGAATCACTCTTTGCCGCCGGATCAACTAA | 750 | 43.2 | MASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDDMVADKKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIN* | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 401223 | 403081 | - | Chy1G000530.1 | Chy01g00053 | 217234 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy01g00053 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 6 | 249 | - | - | |
| Chy01g00053 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Chy01g00053 | 249 | CDD | AdoMet_MTases | 87 | 188 | - | - | |
| Chy01g00053 | 249 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 6 | 249 | - | - | |
| Chy01g00053 | 249 | Gene3D | Vaccinia Virus protein VP39 | 23 | 249 | IPR029063 | - | |
| Chy01g00053 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171 | |
| Chy01g00053 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - | |
| Chy01g00053 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g00053 | Chy-Chr1:401223 | Chy10g00787 | Chy-Chr10:13922894 | 5.00E-83 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy01g00053 | K00588 | - | csv:101205648 | 505.368 |