Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00056 ATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCAGGAACGACCCATGATGATTCGATGGGGTTTAATGGGGTTTCTGCAGCGAGCAAGAGGAAATGGACCCGTTTTTTGCCTTTGTTTGTGGCCATTGTGGTTATAGCAGAGATCGCTTCTCTGAGTCGGCTAGATATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCTCCGGTTTTGCAAGAAGGGAATGAAGGTGGTAGTAAAACGGGCACTGAAATTTCTATTGATGATGGAGGGATTGATGGAATTAGCTGTGAGGAGTGGCTGGAGAAGGAGGATGCCGTGGAGTATTCTAGGGACTTCAAAAGGGAACCTGTTTTGGTTTCTGGCTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAATTTGGATTTAATCCTGGACAGCAGCCTGATGCTATATTCGGATCACCTAATCAAGGTAGTGTTGCTAGTGTACTTCGATCCATGGAATCATCACATTACTATCCTGAGAACAATATTGATTTGGCAAGACGGAAGGGTTATACCGTGGTTATGACCACTAGTCTATCATCAGATGTCCCTGTTGGATATTTTTCATGGGCAGAATACGAGATAATGGCACCAGTGCAGCCAAAGACCGAGCCTGCTCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCTCGCAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAGTTGAATGTCAAAATTGATTCGTATGGTAGCTGCCACCGGAACCACGATGGAAGAGTTGACAAAGTGGAAACATTGAAGCGCTACAAGTTCAGCTTGGCATTTGAGAATTCCAATGAAGAAGATTATGTCACGGAGAAATTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGTGCTCCAAACATCAAGGAGTTTGCTCCTTCTCCTGATTCATTTTTGCATATCAAGGAGTTTTCTGATGTTGAGTCGATTGCCAAGTCCATGAAATACCTTGCTAAAAATCCCCAAATATACAATCAATCGCTAAGATGGAAGTACGACGGTCCATCCGAGTCTTTCAAGGCCCTTGTTGATATGGCAGCAGTGCACTCATCCTGCCGCCTTTGCATCCATATGGCAACCATCATCCACGAGAAAGAAGAAAACAGTCCCAGGTTTTTCTTAGGGGAAACGAAATCATTCGGCGTCGACAATGACAGGTCAGGAAATTTGACGCTGGAGGCTTTAGAATCAACGGTGCTAAAAAAGTTCAATTCTTTGAAACACGTACCAATCTGGAAGCAAGAAAGGCCTGAAAGCATAAGAGGAGGAGATGAACTAAAACTATACAGAATATATCCTGTTGGGTTGACTCAAAGGCAGGCTTTATACACCTTCAGATTCAAAGGCAGTGATGATTTCAGAACTCACATAGAAACACACCCTTGTGCAAAGATGGAAATCATATTTGTCTGA 1485 43.97 MGIFSKQKIWRAGTTHDDSMGFNGVSAASKRKWTRFLPLFVAIVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPVLQEGNEGGSKTGTEISIDDGGIDGISCEEWLEKEDAVEYSRDFKREPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAIFGSPNQGSVASVLRSMESSHYYPENNIDLARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNHDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIKEFAPSPDSFLHIKEFSDVESIAKSMKYLAKNPQIYNQSLRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFFLGETKSFGVDNDRSGNLTLEALESTVLKKFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFKGSDDFRTHIETHPCAKMEIIFV* 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 419901 425005 - Chy1G000560.1 Chy01g00056 217237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00056 494 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 384 IPR001503 GO:0006486|GO:0008417|GO:0016020
Chy01g00056 494 Gene3D - 169 362 IPR038577 -
Chy01g00056 494 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 40 472 IPR001503 GO:0006486|GO:0008417|GO:0016020
Chy01g00056 494 PANTHER GLYCOPROTEIN 3-ALPHA-L-FUCOSYLTRANSFERASE A-LIKE ISOFORM X1 40 472 - -
Chy01g00056 494 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00056 Chy-Chr1:419901 Chy06g01079 Chy-Chr6:8913819 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00056 K00753 - csv:101205170 948.732