Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00064 ATGGCTCAGGTTCCACCTCAACCTCAAGTTCCCAACTCCGGCGCCGATCCGGCTGCCAATGGAGGGGCAAATCAGCATGTCACCACCTCCCTCTATGTTGGAGATCTTGACGTTAACGTCACCGATTCCCAGCTTTATGATCTTTTTAATCAGGTGGGGCAGGTGGTTTCTGTTAGGGTTTGCAGGGATTTAACCAGTCGTCGATCGCTTGGTTATGGCTATGTCAATTACAGCAACCCAGTGGATGCTTCAAGGGCATTAGATGTGCTAAACTTCACCCCTTTGAATGGAAATCCTATTAGAGTCATGTATTCTCATCGTGACCCTAGCGTGCGGAAAAGTGGGTCTGGAAACATATTTATCAAGAACTTGGACAAAGCAATTGATCACAAAGCGTTGCATGATACTTTCTCTGCATTTGGAAGCATTCTATCATGCAAGGTTGCTACAGATTCATCTGGCCAGTCTAAGGGCTTTGGTTTTGTGCAATTTGACACCGAGGAGGCTGCCTTAAAAGCCATAGAAAAGTTGAATGGTATGCTGCTAAATGACAAGCAGGTGTTTGTGGGACCTTTCCTTCGCAAGCAAGAAAGAGAAAGTGTCAGTGAGAAAACAAAATTCAATAACGTTTTTGTCAAGAATCTCGCAGAAACTACCTTTGAAGAAGATTTGAAGAATATGTTTGGGGAGTTCGGACCAATCACCAGTGTTGTGGTGATGAGGGATGGGGAAGGAAAATCAAAATGCTTTGGCTTTGTAAATTTTGAGAATGCGGATGATGCTGCTAGATCTGTTGAAGCACTTAATGGAAATAAGGTTGATGGAAAAGAGTGGTACGTTGGGAAAGCCCAGAAGAAATCTGAAAGAGAAGTTGAACTGAAAAATCGATTTGAACAGAGTGTAAAAGAAGCCGCTGACAAGTATCAAGGGGCAAACTTATATGTTAAGAATTTAGATGATAGCATCGATGATGACAAACTAAAGGAGTTATTCACTGGTTTTGGAACCATTACCTCATGCAAGGTTATGCGTGACCCCAATGGAATCAGTAGAGGATCTGGCTTTGTTGCATTCTCTTCTCCAGAAGAGGCTGCAAGAGCTCTTGCTGAGATGAATGGAAGAATGATTGTGAGCAAACCTCTTTATGTTGCACTTGCACAGAGGAAGGAAGATAGAAGGGCTAGGTTGCAAGCACAGTTTTCCCAAATGCAGCCAATGGCAATGGCATCTTCAGTTGCTCCTCGTGGCATGCCAATGTATCCTCCAGGTGGTCCAGGTATCGGACAACAAATATTCTATGGACAAGCTCCACCTACTATTATTTCCTCACAGCCTGGCTTTGGTTATCAGCAGCAACTCATGCCTGGAATGAGGCCTGGTGGAGGTCCCATGCCAAATTTCTTTGTACCGATGGTACAGCAGGGCCAGCAAGGGCAAAGATCAGGTGGCAGACGTGCTGGTGCCATTCAGCAAACCCAGCAGCCTGTTCCTTTGATGCAGCAGCAGATGCTACCTAGAGGACGAGTCTACCGTTATCCTCCTGGACGTGGACTGCCTGATCTTCCCATGCCCGGTGTTGCTGGAGGAATGTTCTCTGTTCCATATGAGATGGGTGGAATGCCACCACGTGATGCTGTTCACCCTCAACCAGTTCCTGTGGGTGCTTTGGCTTCTGCTCTTGCAAATGCAACTCCAGACCAGCAGAGAACGGTAGGTTCTAAGATCAAATCTGTCATCAAGTTCTCTTTAATTTTAGATAGTGACACTTTAATGGGGTGTACGCAAAGCATTTTGCTCTTGTTACCTGTCTTTCTGTTTGTGTTCTATTATACAGTCATGACTGCCTGTTTTGTTGTTCTTCAGATGCTGGGGGAGAACCTTTATCCACTTGTTGAACAGCTAGAGCCTGATAATGCGGCCAAGGTAACAGGAATGCTATTGGAAATGGACCAAACTGAGGTTCTACATTTGCTTGAGTCACCTGAAGCTCTGAAAGCGAAGGTGGCGGAAGCAATGGAGGTTTTAAGAAGTGTCGCTCAGCAGTCTGGCAATGCAGCTGATCAATTGGCTTCACTATCCTTGACTGACAATCTTGATTCCTAA 2103 45.32 MAQVPPQPQVPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTFEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGNKVDGKEWYVGKAQKKSEREVELKNRFEQSVKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRRARLQAQFSQMQPMAMASSVAPRGMPMYPPGGPGIGQQIFYGQAPPTIISSQPGFGYQQQLMPGMRPGGGPMPNFFVPMVQQGQQGQRSGGRRAGAIQQTQQPVPLMQQQMLPRGRVYRYPPGRGLPDLPMPGVAGGMFSVPYEMGGMPPRDAVHPQPVPVGALASALANATPDQQRTVGSKIKSVIKFSLILDSDTLMGCTQSILLLLPVFLFVFYYTVMTACFVVLQMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQSGNAADQLASLSLTDNLDS* 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 474595 477987 - Chy1G000640.1 Chy01g00064 217245

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00064 700 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 107 IPR000504 GO:0003723
Chy01g00064 700 SUPERFAMILY RNA-binding domain, RBD 29 198 IPR035979 GO:0003676
Chy01g00064 700 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 117 189 IPR000504 GO:0003723
Chy01g00064 700 Pfam Poly-adenylate binding protein, unique domain 620 675 IPR002004 GO:0003723
Chy01g00064 700 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 603 680 IPR002004 GO:0003723
Chy01g00064 700 MobiDBLite consensus disorder prediction 1 23 - -
Chy01g00064 700 SMART rrm2_1 209 281 IPR003954 GO:0003676
Chy01g00064 700 SMART rrm2_1 312 384 IPR003954 GO:0003676
Chy01g00064 700 SMART rrm2_1 118 190 IPR003954 GO:0003676
Chy01g00064 700 SMART rrm2_1 30 103 IPR003954 GO:0003676
Chy01g00064 700 CDD RRM4_I_PABPs 310 388 - -
Chy01g00064 700 CDD RRM2_I_PABPs 115 191 IPR045305 -
Chy01g00064 700 Gene3D - 111 197 IPR012677 -
Chy01g00064 700 Gene3D - 5 110 IPR012677 -
Chy01g00064 700 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 311 388 IPR000504 GO:0003723
Chy01g00064 700 SUPERFAMILY RNA-binding domain, RBD 208 391 IPR035979 GO:0003676
Chy01g00064 700 PANTHER RNA BINDING PROTEIN 621 685 - -
Chy01g00064 700 PANTHER RNA BINDING PROTEIN 18 571 - -
Chy01g00064 700 CDD RRM1_I_PABPs 30 109 - -
Chy01g00064 700 Gene3D - 619 682 - -
Chy01g00064 700 SUPERFAMILY PABC (PABP) domain 621 690 IPR036053 GO:0003723
Chy01g00064 700 Gene3D - 293 400 IPR012677 -
Chy01g00064 700 PANTHER POLYADENYLATE-BINDING PROTEIN 18 571 - -
Chy01g00064 700 PANTHER POLYADENYLATE-BINDING PROTEIN 621 685 - -
Chy01g00064 700 CDD RRM3_I_PABPs 207 286 - -
Chy01g00064 700 TIGRFAM PABP-1234: polyadenylate binding protein, human types 1, 2, 3, 4 family 30 571 IPR006515 GO:0003723
Chy01g00064 700 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 208 285 IPR000504 GO:0003723
Chy01g00064 700 SMART rrm1_1 209 281 IPR000504 GO:0003723
Chy01g00064 700 SMART rrm1_1 30 103 IPR000504 GO:0003723
Chy01g00064 700 SMART rrm1_1 312 384 IPR000504 GO:0003723
Chy01g00064 700 SMART rrm1_1 118 190 IPR000504 GO:0003723
Chy01g00064 700 Gene3D - 198 292 IPR012677 -
Chy01g00064 700 SMART poly_2 615 678 IPR002004 GO:0003723
Chy01g00064 700 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 101 IPR000504 GO:0003723
Chy01g00064 700 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 278 IPR000504 GO:0003723
Chy01g00064 700 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 313 381 IPR000504 GO:0003723
Chy01g00064 700 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 119 186 IPR000504 GO:0003723
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00064 K13126 PABPC; polyadenylate-binding protein - csv:101223017 1174.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00064 Chy-Chr1:474595 Chy04g02001 Chy-Chr4:25802223 4.07E-09 dispersed
Chy02g01015 Chy-Chr2:6848660 Chy01g00064 Chy-Chr1:474595 2.93E-13 dispersed
Chy03g00475 Chy-Chr3:6640587 Chy01g00064 Chy-Chr1:474595 0 transposed
Chy04g01204 Chy-Chr4:18464707 Chy01g00064 Chy-Chr1:474595 7.43E-08 transposed
Chy04g01806 Chy-Chr4:24322278 Chy01g00064 Chy-Chr1:474595 2.79E-09 transposed
Chy05g00217 Chy-Chr5:1815985 Chy01g00064 Chy-Chr1:474595 3.86E-06 transposed
Chy06g00060 Chy-Chr6:414777 Chy01g00064 Chy-Chr1:474595 9.81E-12 transposed
Chy06g00338 Chy-Chr6:2245198 Chy01g00064 Chy-Chr1:474595 1.49E-08 transposed
Chy06g00827 Chy-Chr6:5834511 Chy01g00064 Chy-Chr1:474595 4.03E-23 transposed
Chy11g01926 Chy-Chr11:25379736 Chy01g00064 Chy-Chr1:474595 3.02E-11 transposed
Chy01g00064 Chy-Chr1:474595 Chy06g01071 Chy-Chr6:8732649 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g384 . . . . . Bpe12g00052 . . Cmo19g00614 Cmo11g01376 . . . . . Cpe04g00290 Cpe15g00480 Bhi05g01075 . . . . . . Cla02g00613 Cam02g0642 Cec02g0641 Cco02g0662 Clacu02g0646 Cmu02g0641 Cre02g0965 . Cone8ag1121 Cone3ag0985 Cone10ag1003 . Csa07g00747 . Cme01g00061 Blo04g00479 Blo13g00582 Bda15g00040 Bda14g00509 Bpe15g00903 . Bma03g00511 . . . . Cma11g01739 Cma19g00596 . Car19g00450 Cpe14g00289 Cpe01g00431 . . . . . . . . . . . . . . . . Chy01g00064 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT5G60390 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT5G60390 91.4 9.6e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT1G07920 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07920 91.4 9.6e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 3.4e-201 697.6
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.3 5.8e-201 696.8
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 78.7 2.1e-198 688.3
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 78.7 3.5e-198 687.6
Chy11g01323 . 1 255 Eukaryotic Initiation Factors Gene Family AT1G07930 98.0 7.0e-146 513.8
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07930 91.4 7.9e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT1G07940 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07940 91.4 9.6e-57 218.0
Chy05g01167 . 1 715 Eukaryotic Initiation Factors Gene Family AT3G02270 55.1 3.4e-175 612.1
Chy01g00417 . 59 172 Eukaryotic Initiation Factors Gene Family AT4G27130 88.6 1.9e-54 208.4
Chy06g01817 . 13 125 Eukaryotic Initiation Factors Gene Family AT4G27130 80.7 3.9e-47 184.1
Chy01g00417 . 59 172 Eukaryotic Initiation Factors Gene Family AT5G54760 87.7 4.3e-54 207.2
Chy06g01817 . 13 125 Eukaryotic Initiation Factors Gene Family AT5G54760 80.7 3.9e-47 184.1
Chy06g01817 . 13 125 Eukaryotic Initiation Factors Gene Family AT5G54940 85.8 4.7e-53 203.8
Chy01g00417 . 59 172 Eukaryotic Initiation Factors Gene Family AT5G54940 73.7 1.5e-43 172.2
Chy01g00417 . 59 172 Eukaryotic Initiation Factors Gene Family AT1G54290 88.6 5.1e-55 210.3
Chy06g01817 . 13 125 Eukaryotic Initiation Factors Gene Family AT1G54290 81.6 3.5e-48 187.6
Chy01g00478 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 93.8 4.9e-66 247.3
Chy11g00291 . 51 173 Eukaryotic Initiation Factors Gene Family AT5G35680 93.5 8.7e-63 236.5
Chy01g00478 . 1 146 Eukaryotic Initiation Factors Gene Family AT2G04520 89.0 3.2e-70 261.2
Chy11g00291 . 51 173 Eukaryotic Initiation Factors Gene Family AT2G04520 95.1 5.8e-64 240.4
Chy01g00917 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.4 6.4e-116 413.7
Chy01g00917 . 1 345 Eukaryotic Initiation Factors Gene Family AT5G05470 80.6 6.2e-157 550.4
Chy12g00733 . 24 291 Eukaryotic Initiation Factors Gene Family AT5G20920 75.2 1.3e-109 392.9
Chy12g00733 . 138 278 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 1.4e-38 156.8
Chy12g00733 . 142 285 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 5.1e-56 214.2
Chy10g00035 . 1 465 Eukaryotic Initiation Factors Gene Family AT1G04170 91.4 2.0e-246 848.2
Chy10g00035 . 4 465 Eukaryotic Initiation Factors Gene Family AT4G18330 82.7 4.6e-219 757.3
Chy10g00035 . 93 463 Eukaryotic Initiation Factors Gene Family AT2G18720 75.5 4.9e-163 570.9
Chy01g02129 . 1 395 Eukaryotic Initiation Factors Gene Family AT1G53880 79.3 2.1e-169 592.0
Chy01g02129 . 1 326 Eukaryotic Initiation Factors Gene Family AT1G72340 77.1 1.2e-133 473.0
Chy02g01284 . 56 378 Eukaryotic Initiation Factors Gene Family AT2G05830 74.0 2.1e-133 472.2
Chy02g02387 . 1 655 Eukaryotic Initiation Factors Gene Family AT5G38640 59.9 4.7e-198 688.0
Chy02g02388 . 100 623 Eukaryotic Initiation Factors Gene Family AT5G38640 64.2 5.0e-176 614.8
Chy02g02387 . 329 652 Eukaryotic Initiation Factors Gene Family AT2G44070 75.4 7.9e-141 496.9
Chy02g02388 . 318 623 Eukaryotic Initiation Factors Gene Family AT2G44070 73.6 1.5e-128 456.1
Chy02g02387 . 1 584 Eukaryotic Initiation Factors Gene Family AT1G48970 56.4 9.6e-164 573.9
Chy02g02388 . 57 573 Eukaryotic Initiation Factors Gene Family AT1G48970 57.1 2.9e-152 535.8
Chy05g01167 . 1 723 Eukaryotic Initiation Factors Gene Family AT2G34970 64.0 1.9e-232 802.4
Chy05g01167 . 1 715 Eukaryotic Initiation Factors Gene Family AT3G02270 55.1 3.4e-175 612.1
Chy05g01167 . 1 725 Eukaryotic Initiation Factors Gene Family AT4G18300 59.0 6.5e-201 697.6
Chy12g01567 . 120 1059 Eukaryotic Initiation Factors Gene Family AT1G48410 83.6 0.0e+00 1568.9
Chy02g01948 . 66 927 Eukaryotic Initiation Factors Gene Family AT1G48410 70.3 0.0e+00 1247.6
Chy06g00537 . 1 722 Eukaryotic Initiation Factors Gene Family AT1G48410 72.1 1.1e-305 1046.2
Chy12g00749 . 133 1023 Eukaryotic Initiation Factors Gene Family AT1G48410 58.6 1.5e-302 1035.8
Chy06g00536 . 119 324 Eukaryotic Initiation Factors Gene Family AT1G48410 73.4 5.3e-82 303.1
Chy12g01567 . 184 1059 Eukaryotic Initiation Factors Gene Family AT5G43810 77.0 0.0e+00 1382.1
Chy02g01948 . 69 927 Eukaryotic Initiation Factors Gene Family AT5G43810 74.5 0.0e+00 1334.3
Chy06g00537 . 1 722 Eukaryotic Initiation Factors Gene Family AT5G43810 84.2 0.0e+00 1223.0
Chy12g00749 . 99 1023 Eukaryotic Initiation Factors Gene Family AT5G43810 54.2 1.3e-287 986.1
Chy06g00536 . 1 324 Eukaryotic Initiation Factors Gene Family AT5G43810 66.5 1.2e-115 414.8
Chy12g00395 . 1 921 Eukaryotic Initiation Factors Gene Family AT4G11420 72.8 0.0e+00 1118.2
Chy12g00394 . 1 690 Eukaryotic Initiation Factors Gene Family AT4G11420 60.5 4.4e-179 625.5
Chy12g00393 . 1 176 Eukaryotic Initiation Factors Gene Family AT4G11420 89.8 7.9e-88 322.4
Chy01g01175 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.0 0.0e+00 1126.3
Chy01g01043 . 5 712 Eukaryotic Initiation Factors Gene Family AT5G27640 74.6 0.0e+00 1114.8
Chy01g01175 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.5 0.0e+00 1107.0
Chy01g01043 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 73.0 0.0e+00 1090.1
Chy06g01140 . 48 989 Eukaryotic Initiation Factors Gene Family AT3G56150 67.7 0.0e+00 1138.6
Chy06g01140 . 50 891 Eukaryotic Initiation Factors Gene Family AT3G22860 58.7 4.0e-255 877.9
Chy02g00064 . 5 535 Eukaryotic Initiation Factors Gene Family AT4G20980 81.0 1.7e-255 878.6
Chy02g00064 . 5 535 Eukaryotic Initiation Factors Gene Family AT5G44320 79.1 1.3e-247 852.4
Chy08g00141 . 3 441 Eukaryotic Initiation Factors Gene Family AT3G57290 86.8 7.3e-227 783.1
Chy03g00174 . 2 286 Eukaryotic Initiation Factors Gene Family AT2G39990 76.0 4.4e-127 451.1
Chy06g01392 . 4 289 Eukaryotic Initiation Factors Gene Family AT3G11400 68.9 7.7e-117 417.2
Chy12g01575 . 8 290 Eukaryotic Initiation Factors Gene Family AT3G11400 69.2 1.4e-115 412.9
Chy06g01392 . 2 286 Eukaryotic Initiation Factors Gene Family AT5G06000 67.4 1.4e-107 386.3
Chy12g01575 . 9 287 Eukaryotic Initiation Factors Gene Family AT5G06000 68.7 3.1e-107 385.2
Chy07g01453 . 88 318 Eukaryotic Initiation Factors Gene Family AT1G10840 82.7 1.2e-109 392.9
Chy04g01570 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 65.5 8.8e-92 333.6
Chy04g01570 . 1 305 Eukaryotic Initiation Factors Gene Family AT2G46290 79.2 1.3e-144 509.6
Chy02g01305 . 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.0 8.1e-97 350.1
Chy01g02191 . 246 636 Eukaryotic Initiation Factors Gene Family AT3G13920 93.6 7.7e-210 726.5
Chy04g00666 . 271 661 Eukaryotic Initiation Factors Gene Family AT3G13920 92.6 3.2e-208 721.1
Chy04g01200 . 38 346 Eukaryotic Initiation Factors Gene Family AT3G13920 66.3 8.5e-116 414.1
Chy01g02191 . 246 659 Eukaryotic Initiation Factors Gene Family AT1G72730 89.9 4.2e-216 747.3
Chy04g00666 . 271 684 Eukaryotic Initiation Factors Gene Family AT1G72730 89.2 4.6e-215 743.8
Chy04g01200 . 38 346 Eukaryotic Initiation Factors Gene Family AT1G72730 65.4 1.7e-113 406.4
Chy04g01200 . 22 346 Eukaryotic Initiation Factors Gene Family AT3G19760 86.2 1.7e-161 565.8
Chy01g02191 . 282 659 Eukaryotic Initiation Factors Gene Family AT3G19760 64.3 8.2e-140 493.8
Chy04g00666 . 307 684 Eukaryotic Initiation Factors Gene Family AT3G19760 63.8 9.1e-139 490.3
Chy03g01124 . 1 424 Eukaryotic Initiation Factors Gene Family AT5G11200 85.8 1.6e-224 775.4
Chy03g01124 . 84 424 Eukaryotic Initiation Factors Gene Family AT5G11170 95.0 8.9e-188 652.9
Chy03g01704 . 1 529 Eukaryotic Initiation Factors Gene Family AT3G26400 50.3 1.5e-101 367.1
Chy03g01704 . 1 530 Eukaryotic Initiation Factors Gene Family AT1G13020 50.4 1.1e-107 387.5
Chy11g00288 CCT 2 389 Eukaryotic Initiation Factors Gene Family AT4G38710 55.0 5.2e-74 275.4
Chy12g00020 . 1 233 Eukaryotic Initiation Factors Gene Family AT4G18040 68.8 1.7e-92 335.9
Chy05g00296 . 23 202 Eukaryotic Initiation Factors Gene Family AT4G18040 54.1 4.5e-58 221.5
Chy12g00020 . 48 233 Eukaryotic Initiation Factors Gene Family AT1G29590 62.9 6.7e-73 270.8
Chy05g00296 . 25 202 Eukaryotic Initiation Factors Gene Family AT1G29590 52.5 1.8e-54 209.5
Chy12g00020 . 48 233 Eukaryotic Initiation Factors Gene Family AT1G29550 63.4 3.9e-73 271.6
Chy05g00296 . 25 202 Eukaryotic Initiation Factors Gene Family AT1G29550 52.0 6.9e-54 207.6
Chy05g00296 . 12 193 Eukaryotic Initiation Factors Gene Family AT5G35620 68.3 5.1e-71 264.2
Chy12g00020 . 58 224 Eukaryotic Initiation Factors Gene Family AT5G35620 55.8 1.6e-51 199.5
Chy04g01388 . 48 239 Eukaryotic Initiation Factors Gene Family AT5G18110 84.4 1.0e-96 349.7
Chy02g02139 . 1 799 Eukaryotic Initiation Factors Gene Family AT5G57870 62.5 1.4e-265 912.5
Chy07g00318 . 51 738 Eukaryotic Initiation Factors Gene Family AT5G57870 58.3 2.8e-221 765.4
Chy02g02139 . 2 799 Eukaryotic Initiation Factors Gene Family AT2G24050 55.1 6.1e-226 780.8
Chy07g00318 . 49 739 Eukaryotic Initiation Factors Gene Family AT2G24050 57.0 1.1e-209 726.9
Chy02g02139 . 255 445 Eukaryotic Initiation Factors Gene Family AT1G62410 52.9 3.1e-48 188.7
Chy03g01012 . 1 444 Eukaryotic Initiation Factors Gene Family AT1G77840 60.9 3.2e-134 475.3
Chy03g01012 . 1 445 Eukaryotic Initiation Factors Gene Family AT1G36730 69.1 5.7e-123 438.0
Chy10g01040 . 264 390 Eukaryotic Initiation Factors Gene Family AT1G26630 83.5 3.5e-58 221.1
Chy03g01084 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 80.3 1.2e-55 212.6
Chy02g02123 . 1 141 Eukaryotic Initiation Factors Gene Family AT1G26630 73.8 5.2e-54 207.2
Chy07g00329 . 1 189 Eukaryotic Initiation Factors Gene Family AT1G26630 56.6 2.3e-49 191.8
Chy10g01040 . 264 423 Eukaryotic Initiation Factors Gene Family AT1G69410 83.8 5.5e-76 280.4
Chy03g01084 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 85.5 7.2e-76 280.0
Chy02g02123 . 1 173 Eukaryotic Initiation Factors Gene Family AT1G69410 77.5 3.7e-72 267.7
Chy07g00329 . 1 249 Eukaryotic Initiation Factors Gene Family AT1G69410 54.6 2.0e-62 235.3
Chy03g01084 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 88.1 1.6e-75 278.9
Chy10g01040 . 264 423 Eukaryotic Initiation Factors Gene Family AT1G13950 86.3 2.8e-75 278.1
Chy02g02123 . 1 173 Eukaryotic Initiation Factors Gene Family AT1G13950 79.8 7.5e-73 270.0
Chy07g00329 . 1 249 Eukaryotic Initiation Factors Gene Family AT1G13950 57.4 1.7e-64 242.3
Chy01g01288 . 336 1351 Eukaryotic Initiation Factors Gene Family AT1G76810 68.9 0.0e+00 1147.5
Chy01g01288 . 468 1335 Eukaryotic Initiation Factors Gene Family AT1G21160 59.4 7.0e-263 904.0
Chy08g01016 . 133 374 Eukaryotic Initiation Factors Gene Family AT3G55620 86.8 1.4e-121 432.6
Chy11g00024 . 756 966 Eukaryotic Initiation Factors Gene Family AT3G55620 84.4 3.1e-102 368.2
Chy08g01016 . 137 374 Eukaryotic Initiation Factors Gene Family AT2G39820 68.2 1.0e-92 336.7
Chy11g00024 . 756 966 Eukaryotic Initiation Factors Gene Family AT2G39820 66.4 9.9e-80 293.5
Chy06g01071 . 15 652 Eukaryotic Initiation Factors Gene Family AT2G23350 59.9 1.1e-202 703.4
Chy01g00064 . 5 698 Eukaryotic Initiation Factors Gene Family AT2G23350 54.1 3.2e-194 675.2
Chy04g02000 . 10 172 Eukaryotic Initiation Factors Gene Family AT2G23350 51.5 6.8e-43 172.6
Chy06g01071 . 18 649 Eukaryotic Initiation Factors Gene Family AT4G34110 71.7 2.5e-252 868.2
Chy01g00064 . 1 695 Eukaryotic Initiation Factors Gene Family AT4G34110 64.8 1.8e-242 835.5
Chy03g00475 . 21 677 Eukaryotic Initiation Factors Gene Family AT4G34110 53.2 2.8e-171 599.0
Chy04g02000 . 15 172 Eukaryotic Initiation Factors Gene Family AT4G34110 56.3 8.1e-46 182.2
Chy03g00475 . 1 659 Eukaryotic Initiation Factors Gene Family AT1G22760 56.1 3.1e-189 658.7
Chy06g01071 . 29 625 Eukaryotic Initiation Factors Gene Family AT1G22760 55.4 9.7e-167 583.9
Chy01g00064 . 26 676 Eukaryotic Initiation Factors Gene Family AT1G22760 50.2 6.3e-158 554.7
Chy04g02000 . 14 172 Eukaryotic Initiation Factors Gene Family AT1G22760 53.5 2.2e-41 167.5
Chy03g00475 . 34 661 Eukaryotic Initiation Factors Gene Family AT1G71770 56.2 2.4e-184 642.5
Chy06g01071 . 29 628 Eukaryotic Initiation Factors Gene Family AT1G71770 54.4 7.7e-167 584.3
Chy01g00064 . 26 676 Eukaryotic Initiation Factors Gene Family AT1G71770 50.6 1.2e-159 560.5
Chy04g02000 . 2 172 Eukaryotic Initiation Factors Gene Family AT1G71770 50.3 3.2e-40 163.7
Chy06g01071 . 3 653 Eukaryotic Initiation Factors Gene Family AT1G49760 70.3 4.6e-257 884.0
Chy01g00064 . 25 698 Eukaryotic Initiation Factors Gene Family AT1G49760 66.6 1.4e-242 835.9
Chy03g00475 . 34 676 Eukaryotic Initiation Factors Gene Family AT1G49760 50.2 1.5e-159 560.1
Chy04g02000 . 9 172 Eukaryotic Initiation Factors Gene Family AT1G49760 54.9 1.3e-46 184.9
Chy04g02000 . 14 172 Eukaryotic Initiation Factors Gene Family AT2G36660 64.8 6.4e-56 215.7
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT1G07920 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07920 91.4 9.6e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 3.4e-201 697.6
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.3 5.8e-201 696.8
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 78.7 2.1e-198 688.3
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07930 78.7 3.5e-198 687.6
Chy11g01323 . 1 255 Eukaryotic Initiation Factors Gene Family AT1G07930 98.0 7.0e-146 513.8
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07930 91.4 7.9e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT1G07940 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT1G07940 91.4 9.6e-57 218.0
Chy09g00716 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 95.6 1.2e-253 872.1
Chy05g00564 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 4.6e-253 870.2
Chy09g00715 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 5.7e-251 863.2
Chy09g00713 . 1 450 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 9.7e-251 862.4
Chy11g01323 . 1 294 Eukaryotic Initiation Factors Gene Family AT5G60390 96.3 3.3e-166 581.6
Chy11g01324 . 1 116 Eukaryotic Initiation Factors Gene Family AT5G60390 91.4 9.6e-57 218.0
Chy12g01174 . 1 225 Eukaryotic Initiation Factors Gene Family AT5G12110 52.8 1.9e-48 189.5
Chy03g00237 . 861 1084 Eukaryotic Initiation Factors Gene Family AT5G12110 52.8 1.2e-47 186.8
Chy12g01174 . 1 225 Eukaryotic Initiation Factors Gene Family AT5G19510 61.1 7.9e-52 200.7
Chy03g00237 . 861 1084 Eukaryotic Initiation Factors Gene Family AT5G19510 61.3 3.7e-49 191.8
Chy03g00237 . 864 1094 Eukaryotic Initiation Factors Gene Family AT1G30230 76.2 1.0e-71 266.9
Chy12g01174 . 7 224 Eukaryotic Initiation Factors Gene Family AT1G30230 77.4 2.4e-68 255.8
Chy03g00237 . 864 1084 Eukaryotic Initiation Factors Gene Family AT2G18110 81.2 2.6e-74 275.4
Chy12g01174 . 4 225 Eukaryotic Initiation Factors Gene Family AT2G18110 77.4 2.3e-70 262.3
Chy06g01649 . 1 410 Eukaryotic Initiation Factors Gene Family AT1G57720 70.3 6.1e-167 583.9
Chy06g01650 . 1 411 Eukaryotic Initiation Factors Gene Family AT1G57720 76.1 5.2e-166 580.9
Chy11g01016 . 160 1003 Eukaryotic Initiation Factors Gene Family AT1G56070 94.0 0.0e+00 1604.7
Chy11g00990 . 1 844 Eukaryotic Initiation Factors Gene Family AT1G56070 94.0 0.0e+00 1604.3
Chy11g00992 . 1 844 Eukaryotic Initiation Factors Gene Family AT1G56070 93.8 0.0e+00 1603.6
Chy01g00999 . 1 1036 Eukaryotic Initiation Factors Gene Family AT3G22980 71.0 0.0e+00 1434.5
Chy11g01845 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 88.0 2.0e-221 765.0
Chy08g00780 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 87.8 2.7e-221 764.6
Chy08g00780 . 4 437 Eukaryotic Initiation Factors Gene Family AT1G12920 89.9 2.2e-228 788.1
Chy11g01845 . 4 437 Eukaryotic Initiation Factors Gene Family AT1G12920 89.2 9.4e-227 782.7
Chy08g00780 . 1 437 Eukaryotic Initiation Factors Gene Family AT3G26618 90.8 6.3e-231 796.6
Chy11g01845 . 1 437 Eukaryotic Initiation Factors Gene Family AT3G26618 90.6 1.2e-229 792.3
Chy04g00309 . 12 654 Eukaryotic Initiation Factors Gene Family AT5G10630 58.4 6.5e-203 704.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001217 4 2 2 3 3 2 3 2 2 2 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 2 3 77
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy01g00064 Chy_Chr01 FPKM 18.282051 14.906161 5.8983 5.521722 18.949419 17.500502 20.563824 1.621117 0.0 0.0