Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00118 ATGATGTTGAGGTCGTGTTTCCGGCCGCTCGAGCGGTTTCTTGGCCGGTGGAGTGGTGATGGATTGCTCTGGCACTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTTTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGGCCTGAGGCTTCTCGTTTTGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGATTTTTTGCGTTTGGTTAAACGGGCTTTGCCTGCAAAGCCGCAGATAGCTTCAGTCGGATCATGCTGTCTTGTAGGCGCAATTTCAAATACAAAGTTGTACGTTGCGAATCTAGGTGATTCGAGAGCTGTGCTTGGCCGTAAAGGATCGGGGAGTAAGATAACACCGGTAGTTGCAGAACGATTGTCCACTGATCACAATGTTGGCGTAGATGAAGTTAGGAAAGAAGTTATAGCACTTCATCCCGATGATTCTCATATAGTTGTCTACACCCGTGGAGTATGGAGAATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGACGTTTATTTAAAGAAACCTGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGACCCCCGTTCCTTTAAAACGACCAGTAATGACTGCAGAACCATCGATCCTAACACGAGAGCTTAAACCCCAAGACTTATTCCTCATCTTCGCATCAGATGGCCTATGGGAACAACTAACTGATGAAGCTGCAGTGGAAATAGTTTTCAAGAACCCAAGAGCTGGGATTGCAAAGAGATTAGTAAGTGCTGCCCTCCACGAGGCAGCGAAGAAGCGGGAAATGAGATACTCTGACTTAAAGAAGATCGAAAAGGGGATTCGACGTCATTTCCACGACGACATCACCGTCATCGTCGTGTATCTCGACCACAACGGAAGCTCAAACACCAACCGAACAAAGAACACCATCACCGGGTACACTAGTGCACCTGTTGACATATTTTCTCTCAACTCAAACTATGAAGCTGAGGAAGAAATTTCAGACAATGTTTTGAAAAATTGA 1149 44.91 MMLRSCFRPLERFLGRWSGDGLLWHSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEDFLRLVKRALPAKPQIASVGSCCLVGAISNTKLYVANLGDSRAVLGRKGSGSKITPVVAERLSTDHNVGVDEVRKEVIALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGTPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVSAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNGSSNTNRTKNTITGYTSAPVDIFSLNSNYEAEEEISDNVLKN* 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 763429 765441 - Chy1G001180.1 Chy01g00118 217299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00118 382 CDD PP2Cc 42 337 IPR001932 -
Chy01g00118 382 SMART PP2C_4 25 335 IPR001932 -
Chy01g00118 382 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Chy01g00118 382 SUPERFAMILY PP2C-like 42 339 IPR036457 -
Chy01g00118 382 PANTHER ALPHABET, ISOFORM E-RELATED 4 372 - -
Chy01g00118 382 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 372 - -
Chy01g00118 382 Pfam Protein phosphatase 2C 56 308 IPR001932 -
Chy01g00118 382 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Chy01g00118 382 Gene3D - 25 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00118 Chy-Chr1:763429 Chy04g01778 Chy-Chr4:24116138 6.84E-144 dispersed
Chy01g00118 Chy-Chr1:763429 Chy11g00244 Chy-Chr11:2291313 4.00E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00118 - K01102 csv:101216862 755.362