Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00142 ATGGCTTTCTGTTCCGATTTTCTCAGTAGTCCGACTGAAATATCAATGGACGGTGGTGGAATCTCTGCTAATTATGATGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCACACGTGGGCAGGGACAGTCATGGGACGCGGACAAGTACTACCCATAGCGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTATTGGAGGCATACTTTGTGCAAATTGATGGTACACTGAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAGCAGAACCATCTTCTACAAATGGGAGTAATGTTGACTACAGCAACCCTTGTCGTGAGCGCTTTTGTCGTGGTTGCAGGTATCTTCGGGATGAACATCCATATTGAACTATTTGAATCCGGAAAGGCAGGCATGCCAGAGTTCCTGTGGACCGTTGGTGGTGGTGCTACAGGAACAATCTTCTTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTCTGCTCGAGTAG 549 46.45 MAFCSDFLSSPTEISMDGGGISANYDGNMDASQDHLFGASHVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFESGKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE* 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 965737 967348 - Chy1G001420.1 Chy01g00142 217323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00142 182 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 18 182 - -
Chy01g00142 182 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 182 IPR039204 -
Chy01g00142 182 Gene3D Magnesium transport protein CorA, transmembrane region 26 110 - -
Chy01g00142 182 Pfam CorA-like Mg2+ transporter protein 65 173 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00142 Chy-Chr1:965737 Chy04g01335 Chy-Chr4:19898561 6.82E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00142 - - csv:101213978 347.821