Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00143 ATGCGGGGACAACATTCTCACCCACTCAAGTCGGGTCCCGCCGGACCCGATGACGAAAACGAACCAGTTCGCTCTTATATCGCCGGAATGAACATTCCCTTAAGCGCCGGAATTCGGAAGAAGGGAACTGGAGTCCGACCATGGCTACTCCTGGACTCGACCGGCGGAGCTCAGGTGGTTGAGGCCGGAAAACATGCGATTATGCGGCGGACCGGTCTGCCGGCGCGGGACCTTCGGATTCTCGATCCGTTGCTCTCGTATCCATCTACGGTTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTGGATGAGCTTCAAAGGCGGGTATTGCGGCACCATCAAGCCACTAAGGCCTCTCAGGAGGGCGTTAGCGATGATTCTAATTGGAGGAATCTGTATGACTTAGAGGAGCCTAGATCAAGGACTCAAAGTCCTCCTTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAGCATGAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAGGCTCACCCGGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGAGTGCGTCAGATCAAAAGTCGACTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTGTTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAAATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGACATGGAAGAAGACGATCAGCAATTAGGCAAAGATGACAGGCACGAGTCATGTCTTGTGTCACCTTAA 990 49.19 MRGQHSHPLKSGPAGPDDENEPVRSYIAGMNIPLSAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVDELQRRVLRHHQATKASQEGVSDDSNWRNLYDLEEPRSRTQSPPSYQGFPQAEEEEGKESMKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDDMEEDDQQLGKDDRHESCLVSP* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 967409 969430 - Chy1G001430.1 Chy01g00143 217324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00143 329 Coils Coil 210 230 - -
Chy01g00143 329 MobiDBLite consensus disorder prediction 315 329 - -
Chy01g00143 329 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 24 312 - -
Chy01g00143 329 Gene3D - 36 119 - -
Chy01g00143 329 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 312 IPR039204 -
Chy01g00143 329 Gene3D Magnesium transport protein CorA, transmembrane region 179 322 - -
Chy01g00143 329 MobiDBLite consensus disorder prediction 1 23 - -
Chy01g00143 329 MobiDBLite consensus disorder prediction 162 191 - -
Chy01g00143 329 MobiDBLite consensus disorder prediction 292 329 - -
Chy01g00143 329 CDD Mrs2_Mfm1p-like 48 311 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00143 Chy-Chr1:967409 Chy04g01335 Chy-Chr4:19898561 4.17E-78 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00143 - - csv:101213978 591.652