Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00161 ATGACTAATTCACCATTTCCCTCCGGCCACCGTCCTCCTCTGGTGGCTCACCTTCTCCTCCTTTTCCTCCTCGTCTCTTCATTTTCCCTCTCCTATGGTGATGAACTTCAACCACTTTTAGACCTCAAATCTGCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGCTTTTAGCTCTTGGATTAAAGGGAAGGATGTTTGCAGCAGCTTCCATGGCATTGTATGTAATTCCAATGGCTTTGTAGTAGAAATCAATCTCCCTGCTCAGAACTTATCTGGGATTATTCCGTTTGATTCTATTTGCTCTTTGAAATCTCTTGAGAAGCTGTCTTTTGGGTTGAATTCTTTGTATGGGAAGGTTAGTGATGGTTTGAGAAACTGTTCTAAGTTGAAGTATTTGGATTTGGGTGAGAATTCCTTTTCTGGTGAAGTACCTGATTTGTCTTCTTTAGTGGGATTGAGATTCTTGAGTTTGAATAACAGTGGGTTTTCTGGAGATTTTCCATGGAAGTCTCTTGTTAATCTTACTGATTTGGAGTTCTTGAGCCTTGGAGACAATACATTTAACCCAACAACTTCATTTCCATTAGAGATTCTTCAGCTTAAGAACCTTCATTGGCTTTACCTCTCTAACTGCACCATTTATGGTGAAATCCCATCTAGGATTGGGAACTTGTCTTTGCTTGAGAATCTTGAACTCTCACAAAATAAACTCACTGGTGAAATTCCTTATGAGATTGTGAACTTGAAGAAGCTATGGCAGTTGGAGTTACATGAGAATTCCTTGACGGGGAAGCTACCTGTAGGGCTCGGTAACCTCACTGGACTAAGGAACTTTGATGCCTCATCTAATAATCTTGAAGGTGATTTTATGGAGTTGAGGTCCTTGACCAATTTGAAGTCCTTGCAGCTCTTTGAGAATCGATTTTCCGGTACGATCCCAGAGGAGTTTGGGGACTTTAAGGACCTTATTGAGCTCTCTCTTTACCGAAACAACCTTACTGGCAATCTCCCTCAAAGAATTGGATCTTGGGCAGCCTTCGTTTTCATTGATGTTTCAGAGAATTTCTTGTCAGGACCTATACCTCCAGACATGTGCAAGCAGGGCAGAATGACTGATCTATTGATGCTACAAAACAATTTCATTGGTGGAATCCCAGAAAGCTACACGAATTGTAAATCTTTGAATCGTTTTCGTGTAAATAATAACTCTCTTTCAGGTGTTGTTCCTGCTGGGATTTGGAGCCTGCCAAATCTTAGCATCATTGATCTTTCAATGAATCAGTTTGAAGGTCCTGTCACTTCCGATATTGGTACAGCAAAAGCTCTTGCTCAGTTATTCTTATCGAATAACCGGTTTTCGGATAACTTACCGGCTGAGTTAGGCGAAGCATCGTCCTTAGTCTCAATCAAGCTCGATTCGAACCAATTTGTTGGTCCAATACCTGAATCACTTGGCAAGTTGAAGGACTTAAGCTGCCTTTCTTTGAATGACAACAAATTTTCCGGCAATATACCTAGCTCACTAGGCTCTTGCACTTCTCTTTCTACCATAGATTTATCTATGAATTCATTCTCGGGGGATATTTCAGAGAATCTTGGTTACTTGCCAATTCTTAACTCCTTGAATCTGTCTAACAATGAACTTTCAGGTGAAATTCCAACTAGTTTCTCAAAGTTGAAGCTAAGCAGTTTCGACCTGTCTAATAACAGGTTAATTGGCCAAGTACCTGATTCGCTTGCAATCCAAGCCTTTGATGAAAGTTTCATGGGAAATCCTGGCTTGTGTAGTGAGTCTATTAAATACTTGAGTTCATGTTCGCCAACCTCTAGATCATCCTCCAGCCATCTCACCTCGTTGTTGTCATGTACCATTGCTGGAATTCTACTGTTGCTTGTGTCCTTCTTGTGTTTGTTGTTTGTGAAATGGAAACGTAACAAGGATGCTAAGCATTTACTGAATTCCAAATCATGGGATATGAAGCTATTTCGCATGGTGCGCTTCACGGAAAAGGAAATCATAGATTCAATCAATTCTCACAACTTGATAGGAAAAGGAGGATCTGGATATGTGTACAAAGTCGTACTAAGTAACGGCAAAGAACTCGCCGTGAAACATATATGGCAGTCGAGCTCTAGAGACCAAGCGAATAGTGGGACTAGTGCAACCATGTTAACTAAAAGAAAGACCAGGTCATCCGAATATGATGCAGAAGTAGCTACATTGAGTTCAGTGAGGCATAACAACGTGGTGAAATTATACTGTAGCATTTCAAGTGAGGACAGTAACCTGCTGGTCTACGAGTACTTACCGAATGGAAGTTTATGGGATCAGTTGCATACTAGCAGGAAGATTGAGATGGGATGGCAGATAAGGTACGCGATAGCGGTTGGAGCAGCAAGGGGCCTTGAGTATTTGCATCATGGTTGTGACCGACCTGTCATTCACCGAGATGTAAAGTCAAGTAATATTTTGTTGGATAGTGATTGGAAACCTAGGATTGCAGATTTCGGGCTAGCTAAGATCCTGCAGGATGGCAATGGACATGGGGTTGGAGATTCATCTCATGTTATTGCTGGGACACTCGGTTATATAGCTCCTGAATATGCATACACGTGCAAGATAAACGAGAAGAGTGACGTTTACAGCTTTGGAGTTGTTCTAATGGAACTAGCAACAGGAAAGCAGCCCAATGAGGCAGAGTTTGGGGAGAACAAAGATATTGTACAATGGGCACACAGCAGAATGAGAGAACTAAAAGGTAATCTGAAAGAGATGGTAGATCCTAGCATATCAGAGGCTCAGGTGGAGAACGCAGTCAAAGTGCTAAGGATCGCACTTCGCTGCACGGCTAAGATTCCATCTACAAGGCCCTCCATGAGAATGGTGGTTCATATGCTTGAAGAGGCTGAACCTTGTAACTTTATTGACGTTGTTGTCAAGAAAGAATGTGAAAACTAA 2964 41.63 MTNSPFPSGHRPPLVAHLLLLFLLVSSFSLSYGDELQPLLDLKSAFSSSSSSSSSSAFSSWIKGKDVCSSFHGIVCNSNGFVVEINLPAQNLSGIIPFDSICSLKSLEKLSFGLNSLYGKVSDGLRNCSKLKYLDLGENSFSGEVPDLSSLVGLRFLSLNNSGFSGDFPWKSLVNLTDLEFLSLGDNTFNPTTSFPLEILQLKNLHWLYLSNCTIYGEIPSRIGNLSLLENLELSQNKLTGEIPYEIVNLKKLWQLELHENSLTGKLPVGLGNLTGLRNFDASSNNLEGDFMELRSLTNLKSLQLFENRFSGTIPEEFGDFKDLIELSLYRNNLTGNLPQRIGSWAAFVFIDVSENFLSGPIPPDMCKQGRMTDLLMLQNNFIGGIPESYTNCKSLNRFRVNNNSLSGVVPAGIWSLPNLSIIDLSMNQFEGPVTSDIGTAKALAQLFLSNNRFSDNLPAELGEASSLVSIKLDSNQFVGPIPESLGKLKDLSCLSLNDNKFSGNIPSSLGSCTSLSTIDLSMNSFSGDISENLGYLPILNSLNLSNNELSGEIPTSFSKLKLSSFDLSNNRLIGQVPDSLAIQAFDESFMGNPGLCSESIKYLSSCSPTSRSSSSHLTSLLSCTIAGILLLLVSFLCLLFVKWKRNKDAKHLLNSKSWDMKLFRMVRFTEKEIIDSINSHNLIGKGGSGYVYKVVLSNGKELAVKHIWQSSSRDQANSGTSATMLTKRKTRSSEYDAEVATLSSVRHNNVVKLYCSISSEDSNLLVYEYLPNGSLWDQLHTSRKIEMGWQIRYAIAVGAARGLEYLHHGCDRPVIHRDVKSSNILLDSDWKPRIADFGLAKILQDGNGHGVGDSSHVIAGTLGYIAPEYAYTCKINEKSDVYSFGVVLMELATGKQPNEAEFGENKDIVQWAHSRMRELKGNLKEMVDPSISEAQVENAVKVLRIALRCTAKIPSTRPSMRMVVHMLEEAEPCNFIDVVVKKECEN* 988
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1104811 1107882 - Chy1G001610.1 Chy01g00161 217342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00161 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Chy01g00161 987 ProSiteProfiles Protein kinase domain profile. 678 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00161 987 Gene3D Ribonuclease Inhibitor 194 293 IPR032675 -
Chy01g00161 987 Gene3D Transferase(Phosphotransferase) domain 1 771 980 - -
Chy01g00161 987 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Chy01g00161 987 Pfam Protein kinase domain 681 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00161 987 SUPERFAMILY L domain-like 68 189 - -
Chy01g00161 987 Gene3D Ribonuclease Inhibitor 366 615 IPR032675 -
Chy01g00161 987 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Chy01g00161 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 979 - -
Chy01g00161 987 SUPERFAMILY L domain-like 194 434 - -
Chy01g00161 987 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 17 979 - -
Chy01g00161 987 Gene3D Phosphorylase Kinase; domain 1 662 770 - -
Chy01g00161 987 SUPERFAMILY Protein kinase-like (PK-like) 658 969 IPR011009 -
Chy01g00161 987 SUPERFAMILY L domain-like 375 582 - -
Chy01g00161 987 Gene3D Ribonuclease Inhibitor 294 365 IPR032675 -
Chy01g00161 987 SMART serkin_6 678 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00161 987 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00161 Chy-Chr1:1104811 Chy04g00176 Chy-Chr4:1553221 0 dispersed
Chy04g00177 Chy-Chr4:1556534 Chy01g00161 Chy-Chr1:1104811 2.58E-08 dispersed
Chy04g00178 Chy-Chr4:1557676 Chy01g00161 Chy-Chr1:1104811 3.44E-11 dispersed
Chy01g00161 Chy-Chr1:1104811 Chy12g00907 Chy-Chr12:14466675 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70960 PF00069 Pkinase 8.90E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00161 - - csv:101210252 1815.82