Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00197 ATGTTGCAGTCTTCGATTTGGCGAGTGAAAAAATTGAGTGTTCTGAGGCCTCAGATCTTTGCTCTTGGAAACTTTCGTTTCTCCACCTTTGCTGAACCGTCTTCAAAGCCTAATCCTCCGAGGGTTCCAAATCTCATAAGAGGGACTTTTGTTGATTCTCAATCCTCAGCATTTATAGATGTCATAAACCCAGCAACGCAAGAAGTTGTTTCTCAAGTTCCATTGAGCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTAAACATTACCACGGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCGTGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTATCCCATGGAATTGATACCTATAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCTTTCAATTTTCCAGCAATGATCCCCCTTTGGATGTTCCCAATTGCTGTTACATGTGGAAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCTGGGGCTTCTATAATTCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTGATGGTGTCCTAAATTTGGTTCATGGTACTAATGATGTTGTTAATGCTATTTGTGATGATGAAGATATAAAGGCAATATCATTCGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGTGCAAAAAATCATGCCATTGTCTTGCCCGATGCCAGCATAGATACTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGATGCATGGCACTTAGTACAGTTGTCTTTGTTGGAGAATTCAAGTTTTGGGAGGATGAACTTGTAGTACGTGCCAAAGCTCTAAAAGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGATTCAATCTGGCATCGATAGTGGAGCCACACTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGCATGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACTCCGGATATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGAAGGCTAAAAGTTTAGAAGACGCCATTAGTATCGTTAACGGAAATAGGTATGGAAATGGAGCTTCCATATTCACCACATCTGGGATAGCCGCGAGGAAGTTTCAAGCGGATATTGAAGCTGGACAGGTTGGGATCAACGTTCCAATTCCAGTTCCCTTGCCTTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGGAAGGCAGGGGTGAACTTCTTCACACAGATAAAAACAGTGACACAACAATGGAAAGACTCAACTGGAGGATGTGCAGTCAATCTTGCAATGCCAACCTCTTTGAAGTCATAG 1614 42.69 MLQSSIWRVKKLSVLRPQIFALGNFRFSTFAEPSSKPNPPRVPNLIRGTFVDSQSSAFIDVINPATQEVVSQVPLSTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNLVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASIDTTLNALVAAGFGAAGQRCMALSTVVFVGEFKFWEDELVVRAKALKVNSGTEPDADLGPVISKQAKDRIHRLIQSGIDSGATLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMKAKSLEDAISIVNGNRYGNGASIFTTSGIAARKFQADIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSTGGCAVNLAMPTSLKS* 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1325445 1332623 + Chy1G001970.1 Chy01g00197 217378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00197 537 Pfam Aldehyde dehydrogenase family 50 514 IPR015590 GO:0016491
Chy01g00197 537 CDD ALDH_F6_MMSDH 42 518 IPR010061 GO:0004491
Chy01g00197 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 487 IPR016163 GO:0016620
Chy01g00197 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 15 534 - -
Chy01g00197 537 SUPERFAMILY ALDH-like 37 519 IPR016161 GO:0016491
Chy01g00197 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 495 IPR016162 GO:0016491
Chy01g00197 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 44 518 IPR010061 GO:0004491
Chy01g00197 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 534 IPR010061 GO:0004491
Chy01g00197 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00197 Chy-Chr1:1325445 Chy02g00769 Chy-Chr2:4759868 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00197 K00140 - csv:101204924 1062.37