Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00197 | ATGTTGCAGTCTTCGATTTGGCGAGTGAAAAAATTGAGTGTTCTGAGGCCTCAGATCTTTGCTCTTGGAAACTTTCGTTTCTCCACCTTTGCTGAACCGTCTTCAAAGCCTAATCCTCCGAGGGTTCCAAATCTCATAAGAGGGACTTTTGTTGATTCTCAATCCTCAGCATTTATAGATGTCATAAACCCAGCAACGCAAGAAGTTGTTTCTCAAGTTCCATTGAGCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTAAACATTACCACGGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCGTGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTATCCCATGGAATTGATACCTATAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCTTTCAATTTTCCAGCAATGATCCCCCTTTGGATGTTCCCAATTGCTGTTACATGTGGAAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCTGGGGCTTCTATAATTCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTGATGGTGTCCTAAATTTGGTTCATGGTACTAATGATGTTGTTAATGCTATTTGTGATGATGAAGATATAAAGGCAATATCATTCGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGTGCAAAAAATCATGCCATTGTCTTGCCCGATGCCAGCATAGATACTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGATGCATGGCACTTAGTACAGTTGTCTTTGTTGGAGAATTCAAGTTTTGGGAGGATGAACTTGTAGTACGTGCCAAAGCTCTAAAAGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGATTCAATCTGGCATCGATAGTGGAGCCACACTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGCATGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACTCCGGATATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGAAGGCTAAAAGTTTAGAAGACGCCATTAGTATCGTTAACGGAAATAGGTATGGAAATGGAGCTTCCATATTCACCACATCTGGGATAGCCGCGAGGAAGTTTCAAGCGGATATTGAAGCTGGACAGGTTGGGATCAACGTTCCAATTCCAGTTCCCTTGCCTTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGGAAGGCAGGGGTGAACTTCTTCACACAGATAAAAACAGTGACACAACAATGGAAAGACTCAACTGGAGGATGTGCAGTCAATCTTGCAATGCCAACCTCTTTGAAGTCATAG | 1614 | 42.69 | MLQSSIWRVKKLSVLRPQIFALGNFRFSTFAEPSSKPNPPRVPNLIRGTFVDSQSSAFIDVINPATQEVVSQVPLSTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNLVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASIDTTLNALVAAGFGAAGQRCMALSTVVFVGEFKFWEDELVVRAKALKVNSGTEPDADLGPVISKQAKDRIHRLIQSGIDSGATLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMKAKSLEDAISIVNGNRYGNGASIFTTSGIAARKFQADIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSTGGCAVNLAMPTSLKS* | 538 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1325445 | 1332623 | + | Chy1G001970.1 | Chy01g00197 | 217378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00197 | 537 | Pfam | Aldehyde dehydrogenase family | 50 | 514 | IPR015590 | GO:0016491 | |
Chy01g00197 | 537 | CDD | ALDH_F6_MMSDH | 42 | 518 | IPR010061 | GO:0004491 | |
Chy01g00197 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 287 | 487 | IPR016163 | GO:0016620 | |
Chy01g00197 | 537 | PANTHER | METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE | 15 | 534 | - | - | |
Chy01g00197 | 537 | SUPERFAMILY | ALDH-like | 37 | 519 | IPR016161 | GO:0016491 | |
Chy01g00197 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 61 | 495 | IPR016162 | GO:0016491 | |
Chy01g00197 | 537 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 44 | 518 | IPR010061 | GO:0004491 | |
Chy01g00197 | 537 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 15 | 534 | IPR010061 | GO:0004491 | |
Chy01g00197 | 537 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 312 | 323 | IPR016160 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00197 | Chy-Chr1:1325445 | Chy02g00769 | Chy-Chr2:4759868 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00197 | K00140 | - | csv:101204924 | 1062.37 |