Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00265 ATGCTTCTCCCACTCATGTCGTTTATGATTATTGTGTTGTTATTCACTGTTGTGAACGGTCAAGGCACCCGCATTGGTTTCTACTCCACCTCTTGCCCTCAAGCTGAGTCCATTGTTGCATCTACTGTACGATCTCATTTTCAATCTGATCCTAAGATTGCTCCAGGTTTATTGAGAATGCACTTCCACGATTGCTTCGTTCGGGGTTGTGATGCCTCTGTGCTCCTTGCTGGCTCTAACAGTGAGAGGACTGCACCACCAAACCTTTCGTTAAATGGGTTTGAAGTTATTGACGATGCTAAATCTCAACTTGAAGCTGCTTGTCCTGGCGTTGTATCTTGCGCTGACATTCTTGCTCTCGCTGCTCGTGACTCAGTAGTTTTGACAAGTGGAGTACGTTGGGGAGTGCCCACAGGACGAAGAGATGGGACAATTTCGGTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCTATCGAGGCTCAAAAGAAACAATTTAGTGATAAAGGTCTCAACACTCAAGACCTTGTCACTCTCGTGGGTGGACACACAATAGGCACAACACAGTGCCAATTTTTCAGATACAGACTCTTCAACTTCACAGCAGCAGGCGGTCCAGATCCAACCATGGACCCAGCCTTCGTGACTCAAATGCAGGCATTGTGTCCTCAAAACGGAGACGGAACCCGTAGGGTCGGGCTGGACACGGGCAGCGTCGGTCGGTTCGACACAACCTTCTTCTCAAACTTAAGGAACGGACGTGGGGTTTTGGAGTCGGATCAGAAACTATGGACTGACGCTTCCACTCGTACTTTTGTACAACGGTATTTGGGTTTGAGAGGCGTTTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTGAAGATGAGTAATATTGAAGTTAAAACTGGAAATCAAGGAGAAATTCGTAAAGTTTGTTCTGCAGTTAATTAA 966 46.17 MLLPLMSFMIIVLLFTVVNGQGTRIGFYSTSCPQAESIVASTVRSHFQSDPKIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTAPPNLSLNGFEVIDDAKSQLEAACPGVVSCADILALAARDSVVLTSGVRWGVPTGRRDGTISVASEANNLPGFTDSIEAQKKQFSDKGLNTQDLVTLVGGHTIGTTQCQFFRYRLFNFTAAGGPDPTMDPAFVTQMQALCPQNGDGTRRVGLDTGSVGRFDTTFFSNLRNGRGVLESDQKLWTDASTRTFVQRYLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGNQGEIRKVCSAVN* 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1846143 1848042 - Chy1G002650.1 Chy01g00265 217446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00265 321 Gene3D Peroxidase, domain 2 155 300 - -
Chy01g00265 321 PANTHER PEROXIDASE 11 319 - -
Chy01g00265 321 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Chy01g00265 321 Pfam Peroxidase 39 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 ProSiteProfiles Plant heme peroxidase family profile. 22 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 Gene3D - 26 321 - -
Chy01g00265 321 PANTHER PEROXIDASE 25-RELATED 11 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Chy01g00265 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy01g00265 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00265 Chy-Chr1:1846143 Chy02g02002 Chy-Chr2:23899758 8.42E-125 dispersed
Chy01g00864 Chy-Chr1:7630000 Chy01g00265 Chy-Chr1:1846143 8.66E-76 dispersed
Chy12g00679 Chy-Chr12:9854359 Chy01g00265 Chy-Chr1:1846143 2.12E-85 dispersed
Chy01g00264 Chy-Chr1:1843865 Chy01g00265 Chy-Chr1:1846143 1.12E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00265 K00430 - csv:101217567 635.18