Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00268 ATGGTGGAAGAAGAACTCCCTCTTCAACTAATATGGTTGATTTATGTATTTGTAGACAGTAGCTTTGTCCCGCCGTTGGTATACGCAGTGATGGGGAGCTCAAGGGACATTGCAATAGGCCCCGTTGCTGTCGTATCGCTTTTGCTCGGGACGCTGCTGCAACAAGTATACGATCCAGTGAAACAGTTGGAGCAGTACAAGAGGTTGGCTTTCACTGCAACTTTCTTCGCCGGAGTAACGCAGTTGGCTCTAGGATTCCTCCGGCTGGGATTCTTGATTGACTTTCTGTCGCATGCTGCCATTGTCGGGTTCATGGGCGGCGCTGCCGTGACCATCGCTCTTCAGCAGCTGAAAGGTCTTCTTGGCATATCAAAATTCACCAAGAAAACTGATATCATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGAACCATGGGTGGAACTGGCAGACAATACTCATTGGGGTTTCATTCTTAGCCTTTCTTTTGGCTACAAAATATATTGGCAAGAAATACAAGAAATTGTTCTGGATTCCAGCCATGGCCCCATTAACATCTGTTATACTTTCCACATTTTTTGTGTACATCACAAGAGCAGATAAACATGGAGTTGCGATTGTAAAACACATAGAGAAAGGAATAAATCCCCCATCACTTGATGAGATATTCTTCCATGGAGAAAATCTCACCAAAGGTTTCAAAATTGGAGTTGTTGCGGGTTTGATTGGCCTTACGGAAGCAGTGGCGATTGCAAGAACATTTGCAGATCTAAAAGACTATGAAATTGATGGTAACAAAGAAATGATGGCCCTTGGAACCATGAACATTGCTGGCTCAATGACTTCTTGCTATGTAGCAACAGGGTCGTTCTCTCGGTCGGCGGTGAACTACATGGCCGGCTGCAACACACCGATGTCGAACATCGTCATGGCATGCGTCGTTCTCTTGACATTAGAAGTCATCACACCCCTTTTTAAGTATACCCCTAACGCCATTCTTGCCTCCATTATTATCTGTGCCGTCATCGGCCTCATCGACATCGATGCTGTGATTTTGCTATGGAAGATTGACAAATTCGACTTCATTGCCTGTATGGGAGCTTTCTTGGGCGTCGTGTTTGATTCCGTTGAGATTGGTCTTCTCATTGCTGTTAGTTTGTCATTGTTCAAAATTCTATTGCAAGTAACAAGACCCAGAATTGCGTTGCTTGGAAAACTCCCAAAGATTCCTATTTTTAGGAACATTTTGCAGTACCCTGGGGCAAAGAAGATTGCTGGAGTTCTAATGGTTAGGGTTGATTCTTCAATATACTTCTCCAATGCTAATTACGTCAAAGAAAGGATATTGAGATGGCTGGCAGATGAAACAGAGAAGCTAGAAGACCAATCTATGCCGATCAAAGTCGTGGTCGTCGACATGTCTCCTGTAAACGATATCGACACAAGCGGCATCCATGCCTTGGAGGGTTTGCACTCTCATTTGCATAAGAAGGAAATTGGCCTTGCACTTGCAAATCCAGGGCCAGTGATCATGGAGAAGCTCGTAGCTGCAGAGTTCGATAAGCTCATTGGAGAAGACAACATTTTCCTAAGTGTTAACGAAGCTATTAAGATTTACGCCCCAAATGCTGTTCTTGATCCTTAA 1644 44.22 MVEEELPLQLIWLIYVFVDSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLQQVYDPVKQLEQYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGISKFTKKTDIISVMRSVWSNVNHGWNWQTILIGVSFLAFLLATKYIGKKYKKLFWIPAMAPLTSVILSTFFVYITRADKHGVAIVKHIEKGINPPSLDEIFFHGENLTKGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCNTPMSNIVMACVVLLTLEVITPLFKYTPNAILASIIICAVIGLIDIDAVILLWKIDKFDFIACMGAFLGVVFDSVEIGLLIAVSLSLFKILLQVTRPRIALLGKLPKIPIFRNILQYPGAKKIAGVLMVRVDSSIYFSNANYVKERILRWLADETEKLEDQSMPIKVVVVDMSPVNDIDTSGIHALEGLHSHLHKKEIGLALANPGPVIMEKLVAAEFDKLIGEDNIFLSVNEAIKIYAPNAVLDP* 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1871607 1875746 - Chy1G002680.1 Chy01g00268 217449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00268 547 PANTHER SULFATE TRANSPORTER 1.2-LIKE 19 546 - -
Chy01g00268 547 ProSiteProfiles STAS domain profile. 417 539 IPR002645 -
Chy01g00268 547 SUPERFAMILY SpoIIaa-like 422 538 IPR036513 -
Chy01g00268 547 Pfam STAS domain 418 535 IPR002645 -
Chy01g00268 547 Pfam Sulfate permease family 20 365 IPR011547 GO:0016021
Chy01g00268 547 TIGRFAM sulP: sulfate permease 20 535 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy01g00268 547 CDD STAS_SulP_like_sulfate_transporter 418 532 - -
Chy01g00268 547 Gene3D STAS domain 412 542 IPR036513 -
Chy01g00268 547 PANTHER SULFATE TRANSPORTER 19 546 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00268 Chy-Chr1:1871607 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy01g00268 Chy-Chr1:1871607 Chy07g00704 Chy-Chr7:6877474 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00268 K17470 - csv:101202746 1019.99