Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00287 ATGGCAGAGTTGATGATTCTTCTCAATCTCTTGTTATTCCTTGGTTGCTTTGCTTCCATTTCTCAAGCCCAATTGAAATTTGGATTCTATGCTCGATCTTGTCCTACCGCCAAATCCATTGTCCGTTCAGTTGTGAACGACGCCATTCGAAATGATGCCACCATGGCTGCTGTATTGCTCCGCCTCCATTTTCACGATTGTTTTGTAGAGGGTTGCGATGGTTCGATCTTGATCGACAATGGGGCAAAGTCTGAGAAACTTGCTTTCGGGCATCAAGGGGTACGGGGGTTTGATGTAATAGAAAGAGCCAAGAGAGAATTGGAAGCACAGTGTCCTGGACTTGTTTCTTGTTCTGATATCGTAGCTATGGCTGCTAGAGATGCCATTGTTACGGCAAATGGCCCCGACTATGATATTCCAACCGGCCGGAGAGACGGTAGAGTTTCGGATATATCTCTGGCGAGTGATCTGCCGGATGTGAGTGATTCAATTGACATTTTGAAGAGGAAATTTGCAGAGAAAGGGATGAGTGAAAAGGACTTGGTTTTACTATCAGCTGCCCATACAATCGGAACCACTGCATGCTTCTTCATGACAAATCGCCTCTACAACTTCCCGGGCGGCGGTTCAGACCCAAACATAAACCCGGCGCTGCTACCTGAGCTACAGTCGCAATGTCCTAGAAATGGCGACATCAATGTTCGACTTGGCATCGACCGCGACACTCCCCGCACATTCGACATCAGCATTTTTCAAAACATAAGAAGCGGCTTTGCCGTCCTCGCCTCCGATGCTAGTCTAAACAACGACCCATCGACCCGAGCCATATTGGACTCGTACCTTAGCCCTCTCGCCCCCGTTCTTGGCCCCTCATTTCAACGTGATTTTGTTAACTCCATTGTGAGAATGGGGCAGATTGGGACTAAAACTGGCTCTGAAGGAGAGATTCGAAGGGTTTGTTCTGCTTTTAACTAA 975 47.69 MAELMILLNLLLFLGCFASISQAQLKFGFYARSCPTAKSIVRSVVNDAIRNDATMAAVLLRLHFHDCFVEGCDGSILIDNGAKSEKLAFGHQGVRGFDVIERAKRELEAQCPGLVSCSDIVAMAARDAIVTANGPDYDIPTGRRDGRVSDISLASDLPDVSDSIDILKRKFAEKGMSEKDLVLLSAAHTIGTTACFFMTNRLYNFPGGGSDPNINPALLPELQSQCPRNGDINVRLGIDRDTPRTFDISIFQNIRSGFAVLASDASLNNDPSTRAILDSYLSPLAPVLGPSFQRDFVNSIVRMGQIGTKTGSEGEIRRVCSAFN* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1999479 2004635 - Chy1G002870.1 Chy01g00287 217468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00287 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Chy01g00287 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Chy01g00287 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PANTHER PEROXIDASE 25-RELATED 11 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Chy01g00287 324 Gene3D Peroxidase, domain 2 158 303 - -
Chy01g00287 324 Gene3D - 28 324 - -
Chy01g00287 324 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy01g00287 324 PANTHER PEROXIDASE 11 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00287 Chy-Chr1:1999479 Chy02g02002 Chy-Chr2:23899758 4.44E-95 dispersed
Chy01g00287 Chy-Chr1:1999479 Chy11g00594 Chy-Chr11:6782609 7.11E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00287 K00430 - csv:101221831 624.009