Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00305 ATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGTGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAACAGCAGCAGCAACAACAACAGCTTCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGATGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCAGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATGCCCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGGATAG 801 46.32 MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHAQPQQQQQTQQQSDG* 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2168276 2169076 - Chy1G003050.1 Chy01g00305 217486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00305 266 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 260 - -
Chy01g00305 266 MobiDBLite consensus disorder prediction 237 266 - -
Chy01g00305 266 MobiDBLite consensus disorder prediction 250 266 - -
Chy01g00305 266 MobiDBLite consensus disorder prediction 1 59 - -
Chy01g00305 266 Pfam Core histone H2A/H2B/H3/H4 56 166 IPR007125 GO:0003677
Chy01g00305 266 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 9 260 - -
Chy01g00305 266 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Chy01g00305 266 MobiDBLite consensus disorder prediction 1 39 - -
Chy01g00305 266 SUPERFAMILY Histone-fold 59 175 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00305 Chy-Chr1:2168276 Chy08g01003 Chy-Chr8:17300087 1.11E-82 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17251 PF00125 Histone 6.10E-18 CL0012 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00305 K08066 - csv:101213813 421.394