Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00315 ATGGGGCCATCAGTTTGCAATTACTTTGGAGTGTACTGTGCTCCATCTCTCGATGACCCAAAAATCCAAGTCGTCGCCGGAATTGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTAACGAATTGGGCCTTTTATCAGACCTTGCTCTGCTTCATCTCAATAGTAACAGATTCTGTGGCATTTTGCCACAATCTTTAGCCAATTTATCTCTTCTCTTTGAATTGGATTTAAGCAACAACAGATTCGTTGGCCCTTTTCCTTCTGTTGTTCTTCACCTTCCAAAATTAAAATATCTTGATCTTCGATTCAACGAATTTGAAGGTTCAATTCCCTCTGAACTCTTCAACAAAACCCTTGACGCCATTTTTATAAACAGCAATCGTTTCACCAACATTATCCCGCGAAACATCGGTGGAAAATCAGCTTCTGTAATTGTTTTTGCTAACAACAATTTAAAGGGTTGTCTTCCACCAACCATTGCAAGTTTTGCAAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGTTTATCAGGCTGTTTGCCACAAGAAATTGGGTTTTTGTATAAATTGAAGGTATTGGATGTGAGTTTCAACAAACTAATGGGTCCCTTACCTTATAGTTTAACTGGGTTAGCTCAATTAGAGCAATTGAATTTAGCCCATAATATGTTTAGTGGGAATTTATACGAAGGGATCTGTAGCCTTCCGAATTTGGAGAATGTGACAGTTGCTTACAATTACTTCTGTGAAGAAGTAGGGGTTTGCCGGAATTTGACGGCGAAAGGGATTGCTTTTGATGATCGGCGGAATTGTTTGCCGGAGAAGGCGTTTCAGAGGAGTAAAAAGGAGTGTAGTGCGGTGGTTGAGCGTCCTGTGGATTGTTTTGAGCATCCGTGCGGCGGGGGCGGGGAAGGAGGAGGTTATCGTTCTAGTATTGCGGCGGTTCCGATGCCGGCTCCGACGCCTTATTCCGTTGTTGCCCCTTCGCACTTGTGA 1002 43.01 MGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPNELGLLSDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLHLPKLKYLDLRFNEFEGSIPSELFNKTLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLMGPLPYSLTGLAQLEQLNLAHNMFSGNLYEGICSLPNLENVTVAYNYFCEEVGVCRNLTAKGIAFDDRRNCLPEKAFQRSKKECSAVVERPVDCFEHPCGGGGEGGGYRSSIAAVPMPAPTPYSVVAPSHL* 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2257222 2258223 - Chy1G003150.1 Chy01g00315 217496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00315 333 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 330 - -
Chy01g00315 333 SUPERFAMILY L domain-like 14 253 - -
Chy01g00315 333 Pfam Leucine rich repeat 49 106 IPR001611 GO:0005515
Chy01g00315 333 Gene3D Ribonuclease Inhibitor 2 141 IPR032675 -
Chy01g00315 333 Gene3D Ribonuclease Inhibitor 142 274 IPR032675 -
Chy01g00315 333 PANTHER EXTENSIN-LIKE PROTEIN 1 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00315 Chy-Chr1:2257222 Chy06g00552 Chy-Chr6:3765008 7.70E-122 dispersed
Chy01g00315 Chy-Chr1:2257222 Chy02g01174 Chy-Chr2:8415487 6.54E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00315 - - csv:101218757 637.106