Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00316 ATGGAAGATTCCTCACACCAATCATCGGTGTTTCAGAAGATATGTGGCCATTCTTACCTCACTTCTAGACTTTCTCCTGACCTTCACTCCACACGGTTGACTGGTGTATTTGCTAATGGGGTTTTGGAGAATCCCTTGAAGACAGCTTATCATGGGACTGGCTTGGCTGGAGTTTCACCCACTTCTCCTTTTCTTGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGATTTGCTGTGGATTTTCTTATGGGAGGAGTATCTGCTGCTGTTTCTAAAACAGCCGCTGCTCCAATTGAGCGTGTCAAATTGCTGATCCAAAATCAGGACGAGATGCTTAAGACTGGTAGGCTATCTGAGCCATACAAAGGAATCACCGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATAGCTCTATGGAGGGGAAACACTGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCATCTCTTTTATTTGTTTATTCCCTCGATTATGCTAGAACTCGTCTGGCCAATGATGCCAAGGCTACTAAAAAGGGTGGTGAGAGGCAGTTTAATGGTCTTGTTGACGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCAATGAAGCCCGTGGTTTTGGTTGGCGATTTGCAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGTTGGTGTATCACGATAGGAGCTAGTTTGGCTTCTTACCCAATCGATACTGTCCGCAGAAGAATGATGATGACCTCAGGCGAAGCAGTCAAATATAATAGCTCATTGGATGCATTCAAACAGATCGTTAAGAATGAGGGAACCAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTCTGCGTGCCGTTGCCGGTGCTGGTGTGTTGGCTGGGTATGACAAGCTTCAGCTGCTCGTTCTTGGCAAGAAATATGGTTCCGGTGGTGGTGGTTAA 1137 44.85 MEDSSHQSSVFQKICGHSYLTSRLSPDLHSTRLTGVFANGVLENPLKTAYHGTGLAGVSPTSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKATKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFLASFLLGWCITIGASLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG* 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2259542 2261009 - Chy1G003160.1 Chy01g00316 217497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00316 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 366 IPR018108 -
Chy01g00316 378 Gene3D Mitochondrial carrier domain 78 373 IPR023395 -
Chy01g00316 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 272 IPR018108 -
Chy01g00316 378 SUPERFAMILY Mitochondrial carrier 76 362 IPR023395 -
Chy01g00316 378 Pfam Mitochondrial carrier protein 281 367 IPR018108 -
Chy01g00316 378 Pfam Mitochondrial carrier protein 179 272 IPR018108 -
Chy01g00316 378 Pfam Mitochondrial carrier protein 76 172 IPR018108 -
Chy01g00316 378 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 23 377 - -
Chy01g00316 378 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 23 377 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 PRINTS Adenine nucleotide translocator signature 180 193 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 PRINTS Adenine nucleotide translocator signature 77 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 PRINTS Adenine nucleotide translocator signature 121 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 PRINTS Adenine nucleotide translocator signature 154 166 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 PRINTS Adenine nucleotide translocator signature 285 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy01g00316 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 168 IPR018108 -
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 80 93 IPR002067 GO:0055085
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 93 107 IPR002067 GO:0055085
Chy01g00316 378 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00316 Chy-Chr1:2259542 Chy03g01554 Chy-Chr3:17708965 5.03E-166 dispersed
Chy01g00316 Chy-Chr1:2259542 Chy08g00635 Chy-Chr8:14257997 9.07E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00316 K05863 - csv:101212128 704.516