Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00318 ATGACAACCGGAAGAGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTAGTTCATCGGCAGCGGATACAGGAGGGAAAGGGAAAGGGAAAGTGACGACGGCAAAGATCAATAATAATGTAAGTTGTGGGAGTTATTTGGTGAAGGGAAAAGCCAACCATCCAATGGAAGATTATTTAGTCACTGATTTCAAGAGAGTCAACGAACATGATTTGGGTCTGTTTGCTATTTTTGATGGACATCTGGGACATGATGTTGCTAATTTCTTGCAGAACAATCTCTTTGATAACATCCTTAAACAGGGTGATTTGTGGAGCGAAACAAGAAAGGCAATAAAAAGAGCATACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCTGTGACTGCCATCTTGATCGACGCTCATAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAAAAACGGCGTCGCTTACCAACTTTCCGTTGACCATGAACCCACTAAAGAGAAAAGAGACATCGAAAGCCGTGGTGGTTTTGTATCAAATCTTCCAGGCGATGTTCCACGTGTCGATGGTCAATTGGCAGTTGCCAGAGCATTTGGCGATAAGAGCTTGAAAATCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTTGACGAAACTACGGAGTTCATGATTTTGGCCAGCGACGGCATATGGAAGGTCATGACAAATCAAGAGGCGGTAGAATCAATTAGACATGTAAAGGATGCGAACTTAGCAGCCAAACGACTTATCGACGAAGCAGTTTCTAGGAAAAGCACAGATGACATATCGTGCATTGTTGTTAGGTTTCGATGA 876 43.26 MTTGREILHKMKVKAGFCSSSAADTGGKGKGKVTTAKINNNVSCGSYLVKGKANHPMEDYLVTDFKRVNEHDLGLFAIFDGHLGHDVANFLQNNLFDNILKQGDLWSETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDAHKLVVANVGDSRAVLCKNGVAYQLSVDHEPTKEKRDIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHVKDANLAAKRLIDEAVSRKSTDDISCIVVRFR* 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2287841 2289320 + Chy1G003180.1 Chy01g00318 217499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00318 291 Pfam Protein phosphatase 2C 53 283 IPR001932 -
Chy01g00318 291 PANTHER PROTEIN PHOSPHATASE 2C 3 290 IPR015655 GO:0004722|GO:0006470
Chy01g00318 291 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 3 290 - -
Chy01g00318 291 SUPERFAMILY PP2C-like 33 290 IPR036457 -
Chy01g00318 291 SMART PP2C_4 39 288 IPR001932 -
Chy01g00318 291 Gene3D - 27 291 IPR036457 -
Chy01g00318 291 CDD PP2Cc 42 290 IPR001932 -
Chy01g00318 291 ProSiteProfiles PPM-type phosphatase domain profile. 43 290 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00318 Chy-Chr1:2287841 Chy07g00063 Chy-Chr7:582051 7.08E-125 dispersed
Chy01g00318 Chy-Chr1:2287841 Chy04g00256 Chy-Chr4:2272719 7.32E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00318 K17506 - csv:101211399 552.747