Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00325 ATGGCCAGGCAGTCACAAAATGAAGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTTGGATGGATGCACATTGCCGAGCCTGTTATGAAATTATATACCGAGGCTACAGATGGTTCTTCTATTGAAAGAAAGGAAAGTGCTTTGGTTTGGCAGTATCGAGATGCAGATCCTGGTTTTGGATCATCTCAGGCAAAGGAGATGTTGGATCATTTAGAAAGTGTTTTGGCAAACGAACCTGTTGCAGTCAAAAGCGGCCAATTTATCGTAGAAGTGAAACCGCAGGGGGTTACCAAAGGCCTCGTGGCTGAAAAGATCTTTTCATCAATGGCAGAGGATGGAAAGCTTGCTGACTTTGTGTTGTGTATCGGTGACGACAGATCTGATGAGGACATGTTTGAAATAATTGGTAATGCATTGTCCAGTAACATTCTTTCTCCAACAACGTCGGTTTTTGCCTGCACTGTTGGACAAAAACCAAGCAAAGCCAAATATTATTTAGATGACACAGCCGAAGTAATAAGCATGCTTGAGTACCTGGCTGAAGCTTCTAGTCCATTACCATCCTCTGATGATGAAGAAGGTGAAAATGCTTCTTGA 597 42.88 MARQSQNEEWKICGQSSDFGWMHIAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMAEDGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPTTSVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSDDEEGENAS* 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2333737 2334558 - Chy1G003250.1 Chy01g00325 217506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00325 198 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 192 IPR001830 GO:0003824|GO:0005992
Chy01g00325 198 TIGRFAM T6PP: trehalose-phosphatase 18 180 IPR003337 GO:0003824|GO:0005992
Chy01g00325 198 Gene3D - 59 192 IPR023214 -
Chy01g00325 198 SUPERFAMILY HAD-like 6 180 IPR036412 -
Chy01g00325 198 Pfam Trehalose-phosphatase 3 169 IPR003337 GO:0003824|GO:0005992
Chy01g00325 198 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 2 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00325 Chy-Chr1:2333737 Chy02g00214 Chy-Chr2:1426609 2.82E-99 dispersed
Chy01g00325 Chy-Chr1:2333737 Chy10g00918 Chy-Chr10:14841488 9.90E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00325 K16055 - csv:101209914 391.349