Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00326 ATGATTTCTAGATCTTACACAAATCTTTTAGATTTGGCTTCTGGAAATTTTCCAGCAATGGAAGTGAAAAAGAAGCGATTTCCGCGGGTCATGACTGTTCCGGGTAATGTAGCTGAGCTTGACGATGATCAAGCCTACAGTGTCACGTCTGAAAACCCGTCCTCAATTTCGTCAGATCGGATGATAATTGTAGCAAACCAGCTTCCTTTAAGAGCAAAACGAAGGGAGGATGATAATTCATGGAGTTTCAGTTGGAATGAAGATTCGTTGCTTTTGCAGCTTAAAGATGGCTTACCAGAAGATATGGAGATTCTCTACGTTGGTTCGTTGAAAGTCGATATCCAACCAGAAGAACAAGATGAGGTCTCCCAGATTCTGTTGGAGAAATTTAGGTGTATTCCTGCATTTTTGCCTCCTCATATATTGGAAAAGTTTTATGATGGCTTCTGCAAGAGGCATTTGTGGCCTCTTTTTCATTATATGTTGCCATACTCTGCTGATCAGAAGGGTCGATTCGATCGCTCCATGTGGGAAGCTTATGTATCAGCAAATAAGTTATTTTTCCAGAAAGTAGTCGAGGTCATCAACCCAGATGATGACTATATCTGGATCCATGATTACCATTTGATGGTATTACCCACTTTCTTGAGGAGGCGTTTTAACAGAGTTAAAATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTCAGAGAAGAGATTCTCAAGGCATTACTTAACTCTGATATCATTGGATTCCACACTTTCGATTATGCTCGTCATTTCCTTTCTTGTTGCAGCCGAATGTTGGGTTTGGAATACCAGTCAAAAAGGGGATATCTTGGATTGGAATACTATGGCAGAACGATTGGGATAAAAATAATGCCTGTTGGTATTCATATGAGTCGGATTGAATCGGTGATGAAACTGGCAGATGAGGATGCCAAGACTAGGGAGCTCACGCAGCAATTTGCAGGGAAGACGGTGTTGCTTGGTGTTGATGATTTGGACATTTTCAAAGGTATCAACTTGAAATTGTTAGCTATGGAACAGGTACTAAAGCAACATCCAAAGTGGCAGGGGAAGGCTGTACTGATCCAAATTGTAAATCCTGCCAGAGGTAAGGGAAGAGATTTACAAGAAATAGAAGATGACATAAAAGAAAGCTGTAGAAGGATCAACAAGGAGTATGGGCATCCTGGTTACGAGCCAATAGTACTTCTCGACAGGCATGTGCCGATAACTGAACGGGTTGCTTATTATAGCATTGCTGAGTGTGTAGCTGTAACTGCTGTTAGAGATGGTATGAACCTAACTCCTTATGAGTACGTTGTATGTAGACAGGGAATATCCACCTCCCAAAAATGTTTGAACTTCAGCGGACCAAAAAAGAGCATGCTCGTCATATCTGAATTTATTGGGTGCTCTCCGTCACTGAGCGGAGCATTTCGTGTTAATCCATGGAATGTGGAAAAGACAGCAGAGGCTCTGAATGAAGCAATCTCAATGGCTGATTCAGAGAAGGAGCTGCGACATGAGAAGCATTATCGTTACGTTGCCACACACGATGTCGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGATCATTTCAGGAGAAGATGTTGGGGAATAGGTTTTAGTTTTGGATTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTGTCAGTAGATGCCATTGTATCATCTTACAGTAGGGCCGAAAGTCGGGCCATTCTGTTGGACTATGATGGCACTGTGATGCCCCAAAACTCCATAAATAAGTCACCTAGTGCGCAGGTTATCTCTATCCTTAATACGCTTTGTGCAGATGCAAAAAACGTGGTCTTCATTGTGAGTGGACGAGGGAGGGACAGCTTAAGCAAGTGGTTTCGTCCATGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATTTTTTGAGGTTTGCTTCTACGATCTCTCTCAATCCTCTCCTTGACGTTAGTGGTGGGGTATAG 2037 42.37 MISRSYTNLLDLASGNFPAMEVKKKRFPRVMTVPGNVAELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRREDDNSWSFSWNEDSLLLQLKDGLPEDMEILYVGSLKVDIQPEEQDEVSQILLEKFRCIPAFLPPHILEKFYDGFCKRHLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMSRIESVMKLADEDAKTRELTQQFAGKTVLLGVDDLDIFKGINLKLLAMEQVLKQHPKWQGKAVLIQIVNPARGKGRDLQEIEDDIKESCRRINKEYGHPGYEPIVLLDRHVPITERVAYYSIAECVAVTAVRDGMNLTPYEYVVCRQGISTSQKCLNFSGPKKSMLVISEFIGCSPSLSGAFRVNPWNVEKTAEALNEAISMADSEKELRHEKHYRYVATHDVAYWSRSFLQDMERTCSDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSSYSRAESRAILLDYDGTVMPQNSINKSPSAQVISILNTLCADAKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYFLRFASTISLNPLLDVSGGV* 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2334885 2336921 - Chy1G003260.1 Chy01g00326 217507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00326 678 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Chy01g00326 678 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Chy01g00326 678 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 546 - -
Chy01g00326 678 Pfam Trehalose-phosphatase 593 662 IPR003337 GO:0003824|GO:0005992
Chy01g00326 678 SUPERFAMILY HAD-like 590 673 IPR036412 -
Chy01g00326 678 Gene3D Glycogen Phosphorylase B; 53 313 - -
Chy01g00326 678 Gene3D Glycogen Phosphorylase B; 314 527 - -
Chy01g00326 678 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 664 IPR001830 GO:0003824|GO:0005992
Chy01g00326 678 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 664 - -
Chy01g00326 678 Gene3D - 589 675 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00326 Chy-Chr1:2334885 Chy02g00214 Chy-Chr2:1426609 0 dispersed
Chy01g00326 Chy-Chr1:2334885 Chy10g00918 Chy-Chr10:14841488 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00326 K16055 - csv:101209914 1337.78