Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00328 | ATGGACCGCCGTGTTCGTACAAACCCATTCCTCTCCGAAAAGGAAGATCCCGAAGCCACCTCCGACGACGGCTTACCCGAATCACCCTCCGACTGCAATGACTCAAAACCCACCGCTGCTCTACCTCCTAAAAAGAGTAGAAGGGGAGTGCAGAAGAGAGTGGTGTCCGTACCGATCGCTGACGTGGAAGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGTTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGTTCCAAGGGATGCCCAGCAAGAAAGCAAGTAGAGAGAAGCCGTGTGGATCCCACCAAGCTCGTTATTACCTACGCCTTCGACCACAACCACCAACTCCCGGTCACCAAATCTCACCACCACCACCACCACCACCACAATTCCTCCCCGTCCTCCGCCGTGATCGCCGCCGCATCAGCCGCAACCGACTTTCCCTCTCCAGGGAGCACTACGACGTCGTCCTCCACTTCCTCCGGCGACAACACCAACGCCGCTCCGTCGTCCCCGGCGGCGAAGTTTGAGGAGGCGGCTGCGGTTTTCGCGAGTCAGCCGGAATTGGAACTCGGGGACGACTCGCTGATGATAAAACCATGCATCGGAGATTTCGGGTGGTTGGGTGAGGTGGCGTATGACAGAATCCTGGAGGGCCCGATTTGCGGAGGTGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACTAGAGGAGATGACGAGGAGGAGTCGTTATTTGCAGATCTTGGGGAATTACCCGAAGGATCGGTGGTGTTCGGCCGACGGCGAACGGTCCAACCGAACGGACCGAACCGGACATGTGGCACAGTTTTAAACTGCTAG | 903 | 56.04 | MDRRVRTNPFLSEKEDPEATSDDGLPESPSDCNDSKPTAALPPKKSRRGVQKRVVSVPIADVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPVTKSHHHHHHHHNSSPSSAVIAAASAATDFPSPGSTTTSSSTSSGDNTNAAPSSPAAKFEEAAAVFASQPELELGDDSLMIKPCIGDFGWLGEVAYDRILEGPICGGGDIFDDADVMVLSTRGDDEEESLFADLGELPEGSVVFGRRRTVQPNGPNRTCGTVLNC* | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2345462 | 2347654 | - | Chy1G003280.1 | Chy01g00328 | 217509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00328 | 300 | ProSiteProfiles | WRKY domain profile. | 75 | 135 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00328 | 300 | MobiDBLite | consensus disorder prediction | 137 | 156 | - | - | |
Chy01g00328 | 300 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Chy01g00328 | 300 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 20 | 286 | IPR044810 | GO:0003700 | |
Chy01g00328 | 300 | PANTHER | OS01G0750100 PROTEIN | 20 | 286 | - | - | |
Chy01g00328 | 300 | Gene3D | WRKY domain | 61 | 136 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00328 | 300 | Pfam | WRKY DNA -binding domain | 76 | 133 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00328 | 300 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Chy01g00328 | 300 | MobiDBLite | consensus disorder prediction | 164 | 189 | - | - | |
Chy01g00328 | 300 | SMART | WRKY_cls | 74 | 134 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00328 | 300 | SUPERFAMILY | WRKY DNA-binding domain | 70 | 135 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00328 | 300 | MobiDBLite | consensus disorder prediction | 162 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00328 | Chy-Chr1:2345462 | Chy02g00062 | Chy-Chr2:462320 | 2.38E-35 | dispersed | |
Chy01g00328 | Chy-Chr1:2345462 | Chy12g00064 | Chy-Chr12:562489 | 6.07E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17254 | PF03106 | WRKY | 1.20E-24 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00328 | - | - | csv:101209422 | 555.058 |