Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00330 ATGGCGTCTATTATTTCTCATCTTTTCATTGTTCTTTCTCTTTTAGCTTTTTCTGCCAATGGGCAACTCTCCTCTGGCTTCTACTCGAAAAGTTGTCCTAGACTTGAATCTATTGTTCGTGCTGGTATGACTAAAGCTGTTAACATAGAAAAACGTATTGGAGCTTCCATCCTTCGTTTGTTCTTCCACGATTGCTTCGTTAATGGTTGTGATGCTTCTATATTGCTTGATGATACTCCAACAGCTAGAGGTGAAAAAAATGCATTTCCAAATAGGAACTCGGCTAGAGGGTTCGAAGTAATTGACGATATTAAAACTCAGGTGGAAGCTGCTTGTAATTTAACAGTTTCATGTGCTGATATTCTTGCTCTAGCCACGCGTGATGGAGTCGTTTTGCTTGGAGGACCAAATTGGGCTGTACCACTTGGTCGAAAGGACTCGAGGACAGCGAGTGAGAGCGGAGCAAACAACAACCTTCCAGGACCATCCTCCGACCTCTCAACACTAATATCAATGTTTAACGCTCAAGGCTTCACCCCCCGTGAAATGACAACCCTCTCGGGTGCTCACACCATAGGCATGGGCCAATGTCAATTCTTCCGAACTCGCATCTACAATGAAACCAATATCGATGGCACCTTCGCCACCCAAAGGCAAGCCAACTGCCCATTTAACGGTGGTGACAGCAACTTAGCCCCTCTTGACTCAACCAATACCGTGTTTGACAACAAATATTACGTTGACTTAACTAATAGGCGCGGTCTGTTTCATTCGGACCAAGAACTCTTCAATGGTGGTTCACAAGATGCGTTGGTTACGACCTACAGTAAAAATCCCAATCTCTTTAAATCGGATTTTGTAAAGGCGATGATCAAGATGGGAAATCTTGGTCCTGCGAGTGGAACGGTCACTGAGATAAGAAAAAATTGTGCAGTCGAGGTTACTGTTGTCATCTCTTCATGCAATATAATCCCTCAGTAA 981 43.73 MASIISHLFIVLSLLAFSANGQLSSGFYSKSCPRLESIVRAGMTKAVNIEKRIGASILRLFFHDCFVNGCDASILLDDTPTARGEKNAFPNRNSARGFEVIDDIKTQVEAACNLTVSCADILALATRDGVVLLGGPNWAVPLGRKDSRTASESGANNNLPGPSSDLSTLISMFNAQGFTPREMTTLSGAHTIGMGQCQFFRTRIYNETNIDGTFATQRQANCPFNGGDSNLAPLDSTNTVFDNKYYVDLTNRRGLFHSDQELFNGGSQDALVTTYSKNPNLFKSDFVKAMIKMGNLGPASGTVTEIRKNCAVEVTVVISSCNIIPQ* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2365707 2368205 - Chy1G003300.1 Chy01g00330 217511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00330 326 MobiDBLite consensus disorder prediction 143 163 - -
Chy01g00330 326 Gene3D Peroxidase, domain 2 160 293 - -
Chy01g00330 326 MobiDBLite consensus disorder prediction 149 163 - -
Chy01g00330 326 ProSiteProfiles Plant heme peroxidase family profile. 22 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Chy01g00330 326 Pfam Peroxidase 40 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PANTHER PEROXIDASE 72-RELATED 15 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Chy01g00330 326 Gene3D - 27 310 - -
Chy01g00330 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 SUPERFAMILY Heme-dependent peroxidases 22 312 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy01g00330 326 PANTHER PEROXIDASE 15 311 - -
Chy01g00330 326 CDD secretory_peroxidase 22 312 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00330 Chy-Chr1:2365707 Chy02g01195 Chy-Chr2:8602860 9.01E-130 dispersed
Chy01g00330 Chy-Chr1:2365707 Chy03g00215 Chy-Chr3:2013946 8.68E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00330 K00430 - csv:101208932 609.757