Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00337 ATGGCTTCCACTAAAGAACGCGACAACTTCGTTTACATCGCTAAGCTCGCTGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTGGATGTTGAATTGACAGTTGAGGAAAGAAACTTGCTTTCTGTTGGATACAAGAATGTGGTTGGTGCACGGAGAGCCTCGTGGAGGATATTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCTAAACGCATCAAAGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGCAATGATATCATGATGGTGATTGACGAGCACCTGATTCCATCGGCTTCAGCTGGGGAATCAACAGTATTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGCTCAGCCGAATCTGAGTTACCCCCTACACATCCTATCCGCTTGGGGTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATTTTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCTGAACTTGATACCCTGAATGAAGAGTCATACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGATATCCCAGAAGATGGAGATGATGCCCAAAAGATCAATGGAACTGCCAAGGTTCCCGGTGGTGACGATGCCGAGTTCTCAATTTCAGACTTATTACCTTCAGTTGCAATGAGTTTCGTTAATGGAGTTTCTGCTGTGATTCTCGATCTCGATGGAACCCTTTTGGACACTGAGAGGGTGACAAAAGATGTGTTGAAGGAATTTTTGGGAAAGTATGGGAAAGTTTGGGAGAAGAAGAGGGAAGAGGAGAAGAGATTGGGGATGACCCAGAAAGAATATGCAGCTGAAGTTGTTAGGGATTATGGCCTTCCATTGACCCCAGATCAATTTATTCAAGAAATTACTCCCATGTACTGGGAAAAGTGGCCTTCTGTTAAAGCACTTCCTGGTGCTGATCGTCTTATCAAACATCTTTACTCTCATAAGATCCCGTTCGGGCTCGCTTCAAATTCTTCAAGTGAATATATCCATGCTAAAATTTCTTGTATGAAAGGTTGGAAGGACTGGTTTTCTGTGATTCTTGGTAGTGACCAGGTTATTGAAGGGAAACCTGCTCCTTATCTATTTGAAGAGGCAGCAAAGAGAATGGGTGTAGATGCTTCTCATTGTTTAGTTATTGAAGATTCCTTGGTTGGCGTCAAAGCAGCTAAAGCTGCTAAGATGAAGGTTGTAGCTGTCCCATCCCGTGGGGGAATTGAGTGTTCTTCCTTAGCAGATGAAGTGCTTAATTCGTTATTAGAATTTCAGCCTGAGCTGTGGGGTCTTCCCTTATTTGAAGACTGGGTAGATAGAACCTTACAAATTGATCCAATATATGTGAGCTCTCGATACGTTAATAGGTCCATGAGTGAAATCTCAGAGGATGCATCAATACCTGACCAAGTTTTTGGAACATTCTTCGGTTGGGCTGGCACTGGCACGGCCTGGACCATCAAGGTTGTGGTTAACATCGGATGGAATTGCAGTTCATGTACAAAAAAGAATAGGATCTGGAAACTATGGTCAGTTGATGGCTGTGATAGCAAAATATTTCAGCAGCAAATGCAATTCATGCTTGTTGGCTACATCTGCGGATTGAATGGCAAGGATCTTACAAATATGGATGTGAGAGAGATTGAAGAGTTCAAGTATATCGCGAAGACGTCACTTGACCGAACTATGTTTGTCAGTCATTCTTGCACATCTCTTACTGTAGAAGAAACTTCTAGCATTAATGGATGA 1929 41.94 MASTKERDNFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMMVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVPGGDDAEFSISDLLPSVAMSFVNGVSAVILDLDGTLLDTERVTKDVLKEFLGKYGKVWEKKREEEKRLGMTQKEYAAEVVRDYGLPLTPDQFIQEITPMYWEKWPSVKALPGADRLIKHLYSHKIPFGLASNSSSEYIHAKISCMKGWKDWFSVILGSDQVIEGKPAPYLFEEAAKRMGVDASHCLVIEDSLVGVKAAKAAKMKVVAVPSRGGIECSSLADEVLNSLLEFQPELWGLPLFEDWVDRTLQIDPIYVSSRYVNRSMSEISEDASIPDQVFGTFFGWAGTGTAWTIKVVVNIGWNCSSCTKKNRIWKLWSVDGCDSKIFQQQMQFMLVGYICGLNGKDLTNMDVREIEEFKYIAKTSLDRTMFVSHSCTSLTVEETSSING* 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2449352 2458755 + Chy1G003370.1 Chy01g00337 217518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00337 642 Coils Coil 13 33 - -
Chy01g00337 642 SMART 1433_4 7 248 IPR023410 -
Chy01g00337 642 Pfam 14-3-3 protein 14 235 IPR023410 -
Chy01g00337 642 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 280 483 - -
Chy01g00337 642 SFLD Haloacid Dehalogenase 280 483 - -
Chy01g00337 642 Coils Coil 195 215 - -
Chy01g00337 642 Gene3D - 282 481 IPR023214 -
Chy01g00337 642 Gene3D Putative phosphatase; domain 2 293 361 IPR023198 -
Chy01g00337 642 Pfam Haloacid dehalogenase-like hydrolase 282 462 IPR041492 -
Chy01g00337 642 SUPERFAMILY HAD-like 280 491 IPR036412 -
Chy01g00337 642 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Chy01g00337 642 Gene3D - 1 249 IPR036815 -
Chy01g00337 642 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Chy01g00337 642 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Chy01g00337 642 PANTHER BIFUNCTIONAL RIBOFLAVIN KINASE/FMN PHOSPHATASE-LIKE 277 635 - -
Chy01g00337 642 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 361 462 IPR006439 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Chy01g00337 642 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Chy01g00337 642 PANTHER RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE 277 635 IPR023468 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00337 Chy-Chr1:2449352 Chy10g01053 Chy-Chr10:15730984 3.10E-138 dispersed
Chy03g01366 Chy-Chr3:16525667 Chy01g00337 Chy-Chr1:2449352 1.55E-63 dispersed
Chy03g01367 Chy-Chr3:16528069 Chy01g00337 Chy-Chr1:2449352 3.45E-67 dispersed
Chy01g00337 Chy-Chr1:2449352 Chy04g00255 Chy-Chr4:2267948 6.09E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00337 K06630 K20884 csv:101207959 691.034