Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00340 ATGTCTTCTTCTGCTTCTTCTTCTTCTTCTTCATCCTTTCTTTTCTCCGCCGTAATCTCGATTTTATTATTCATTTCCACCTCTGTTTCTGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACTAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCCGTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCTCTTTACCCTTTCAAAGTTCCCATCCATTTCTCCAATTCTTCATTTTCCTTTGCATCTTCTTTCATTTTTTCTGTTGCCCCTCAACCACATCTTCTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGAACTAGCTCAGCTCAGCATTTGGGGCTTTTCAATTTCACCAATAATGGGAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTTCAAAATCTGGAGTTCAACGACACCAATGATAACCATGTGGGTGTGGATTTGAATTCTCTTGAATCTATTGCTTCCTTTGCAGCTGGGTTTTGGAGTGGACCTGATGATGGAGAATTCAAGGAATTGAAGATCAATAATGGAGAAACTTATCAGGTTTGGATTGAATGTCTTGATTCTTTAGTTAATGTCACAATGGCTGAAGTGGGAATGAAAAGGCCTAGAAAACCATTGATATCTCTGTTTGTTAATTTCTCTGTATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACTGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCCAATTTGTCTATAGGTGATGCTTTATTGATAACAGATTTGCCATCATTTGTTCTTCAAAAAGAGGGCTCCATTTTTAACTCAAGAGCTTTCATATTGGGAATAACTTTGGGGGGTGTTGGACTTGTGATTATCTGTTGTTTTATAATCTATGGTGTTGTAATTATCAAAAAAAGGGGAAGAAAAAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCGCATAGGTTTGCTTATGAAGATGTTTATGAAGCAACTGGCGGGTTCTCAGAAGCCAATGTAATTGGATCTGGGAGAAACGGGAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTCTGTTGAAGCTGAGAGTGGAATGAGGGAATTTGTAGCTGAGATTTCAAGTTTAGGAAGATTAAAGCATAGAAATCTAGTTAAGCTTATAGGATGGTGCAAAAAGGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAGAAACTATTCGAGTGTAATGACAATGAAATGCTGAGTTGGGACAAAAGAATGAAAATTTTGAAAGATGTAGCCACAGGGTTGCTTTATCTACACCAAGGCTGGGATTCCAAGGTTCTGCATAGAGACATAAAAGGAAACAACGTGCTACTCGACAAGGACATGAATGCAAGGTTGGGAGATTTTGGGTTGGCTCGAATGCAACCCCATCAAAAAACGGCAGACACAACTCGTGTAATGGGGACTGTCGGGTATCTGGCACCAGAGGTGGTTCGAACAGGGAGAGTATCAGCACAAGCAGACGTTTTTGGGTTCGGAGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAGGCCATGGTTGATAGATTGGGTAAAAGGATTAATGGAGAGGAATGAGATTGGATTAGCAGTTGATGAGAGATTGAGAGTTGAGGAAATAAGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGATTATTATGTGCACATAATGAAGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAATATTTTGTGTGAGAGAAGTGGAAGTGGTTCAAATGATGGATTGTTAAATAGACTAAGATCAACAAGAATACTCTCTGAGATTTCTCAAGGCAACAATTTTCAGCAAAATCATCCAACGTTTGAAGAAATCAAAACGTCTTCATCTTCAACATCACTCATTGAATCTGATATTTTAAAGAACGGCCGCTAG 2070 39.66 MSSSASSSSSSSFLFSAVISILLFISTSVSATEFVFNTNFTSTNTLLFGNATIDSSVLILTRDSPFTIGRALYPFKVPIHFSNSSFSFASSFIFSVAPQPHLLPGHGFAFLFTPFTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDSFQNLEFNDTNDNHVGVDLNSLESIASFAAGFWSGPDDGEFKELKINNGETYQVWIECLDSLVNVTMAEVGMKRPRKPLISLFVNFSVLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIGDALLITDLPSFVLQKEGSIFNSRAFILGITLGGVGLVIICCFIIYGVVIIKKRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATGGFSEANVIGSGRNGKVYKGTLGRSKVAVKRISVEAESGMREFVAEISSLGRLKHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECNDNEMLSWDKRMKILKDVATGLLYLHQGWDSKVLHRDIKGNNVLLDKDMNARLGDFGLARMQPHQKTADTTRVMGTVGYLAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGRPWLIDWVKGLMERNEIGLAVDERLRVEEISGNEIDEMERMVCLGLLCAHNEAGARPTMQQVVNILCERSGSGSNDGLLNRLRSTRILSEISQGNNFQQNHPTFEEIKTSSSSTSLIESDILKNGR* 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2481488 2483557 - Chy1G003400.1 Chy01g00340 217521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00340 689 CDD STKc_IRAK 365 631 - -
Chy01g00340 689 PANTHER - 21 680 - -
Chy01g00340 689 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 21 680 - -
Chy01g00340 689 ProSitePatterns Protein kinases ATP-binding region signature. 365 386 IPR017441 GO:0005524
Chy01g00340 689 Pfam Protein kinase domain 360 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00340 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Chy01g00340 689 Gene3D Transferase(Phosphotransferase) domain 1 435 640 - -
Chy01g00340 689 SUPERFAMILY Protein kinase-like (PK-like) 335 629 IPR011009 -
Chy01g00340 689 Gene3D Phosphorylase Kinase; domain 1 344 434 - -
Chy01g00340 689 Pfam Legume lectin domain 32 268 IPR001220 GO:0030246
Chy01g00340 689 Gene3D - 30 274 - -
Chy01g00340 689 CDD lectin_legume_LecRK_Arcelin_ConA 32 267 IPR001220 GO:0030246
Chy01g00340 689 ProSiteProfiles Protein kinase domain profile. 359 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00340 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 269 IPR013320 -
Chy01g00340 689 SMART serkin_6 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00340 Chy11g01134 CCT
Chy01g00340 Chy11g01134 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00340 Chy-Chr1:2481488 Chy04g02165 Chy-Chr4:26757558 1.13E-157 dispersed
Chy01g00340 Chy-Chr1:2481488 Chy12g00930 Chy-Chr12:14686138 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70969 PF00069 Pkinase 9.60E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00340 - - csv:101216388 1232.62