Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00360 ATGGGTGGGTGTGTCTCTACAAGCAGCCATAGTACATGTAGTAGCCAAAGCAATGGGGAATCAGTTTCTTCTTCATGTATGGGAATTGGATTTGTATGTCGAAAGCGAACAAAAAGAACATTCTCCGACCATGTTTATGCTCTTCAGAATCTTCCTTCAGCTCCTAACAGGATCTTCATGAATGGAAAAAGTCGTTCTTCTTGCATTTTCACTCAACAAGGTCGCAAGGGGATAAACCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCAGAGGACACGATCTTTTGTGGTGTGTTTGATGGACATGGACCTTACGGTCATCTCGTTGCTCGTAAAGTGAGGGATACATTGCCGATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGACTCTGGGAAAACCTGTTTCCAGAGGAATTTGAAGACACCTCCAGATTGTGAGGATTCTGAGAAAGATGGTTTTGTAGAGGACTCGCAGAATTCAGTATGGAAAGATGCATTTTTGAACTCCTATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGTAGTGGTAGTACTGCAGTTACCATAGTTAAACAGGGGTCAAATCTGTTCATGGGGTACATTGGGGATTCAAGAGCAATCCTAGCTTCGAAAGATGCCAATGATTCCACCGTGGCAGTTCAATTAACCGTGGATCTTAAGCCAGATTTGCCAAGAGAAGCTGAAAGAATAAAACGGTGTAAAGGCAGGGTCTTTGCATTGCAGGATGAGCCAGAAGTGCCAAGGGTGTGGTTACCTTTCGATGATGCTCCTGGTTTAGCAATGGCTCGAGCATTTGGTGACTTCTGTTTGAAAGAATATGGGGTTATCTCTATACCTGAATTCTCTCATCGAACCCTAACCGATGCTGATCAGTTCATCGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGACATAGTATCCTCAGCCCCAACCCGGGCATCAGCTGCGAGGTCCGTGGTGGACTCAGCTGCTCGTGAATGGAAACTCAAATACCCTACCTCGAAAATGGATGACTGTGCAGTCGTCTGCTTATTTTTGGACAGGAGGATGGACTCTGAATCTGACTGTGACGAGCAAGCCTTCTCATCTGCAACATTGCGTAGTAATCATTCGGGTACAGCTATTGAATCCGATGATGGCCAAAGGTCCGAGCCATGTTTGCAAAGGAATAACACTGTCAGATCATCCGAAGAAAACAAGGGATTACCTGTTGACGACATGGAGATTGGCGATGCTGTACCTGCAGAAGATCAAAACTGGTTGGGTTTGGAAGGAGTCACTCGAGTGAACTCACTTGTTCAACTCCCTAGATTTTCCGAGGAAAGGCCTGTGTCATAG 1416 45.06 MGGCVSTSSHSTCSSQSNGESVSSSCMGIGFVCRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNDSGKTCFQRNLKTPPDCEDSEKDGFVEDSQNSVWKDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVDIVSSAPTRASAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDRRMDSESDCDEQAFSSATLRSNHSGTAIESDDGQRSEPCLQRNNTVRSSEENKGLPVDDMEIGDAVPAEDQNWLGLEGVTRVNSLVQLPRFSEERPVS* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2603736 2605644 + Chy1G003600.1 Chy01g00360 217541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00360 471 MobiDBLite consensus disorder prediction 1 24 - -
Chy01g00360 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Chy01g00360 471 Gene3D - 56 375 IPR036457 -
Chy01g00360 471 Pfam Protein phosphatase 2C 163 349 IPR001932 -
Chy01g00360 471 MobiDBLite consensus disorder prediction 393 439 - -
Chy01g00360 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Chy01g00360 471 SUPERFAMILY PP2C-like 56 373 IPR036457 -
Chy01g00360 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Chy01g00360 471 MobiDBLite consensus disorder prediction 393 424 - -
Chy01g00360 471 SMART PP2C_4 55 370 IPR001932 -
Chy01g00360 471 CDD PP2Cc 65 372 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00360 Chy-Chr1:2603736 Chy03g00380 Chy-Chr3:5269049 1.40E-141 dispersed
Chy01g00360 Chy-Chr1:2603736 Chy05g01064 Chy-Chr5:15162792 9.21E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00360 - - csv:101204594 931.398